RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CDKN2BP42772 138 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 SCNN1BP51168 640 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 CLDN2P57739 230 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 MAXP61244 160 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 RFTN1Q14699 578 aaPredicted RBP9.84□□□□□ -0.83
YBX3-212ENST00000542002 PTPRRQ15256 657 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 SHBQ15464 509 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 SLC9A4Q6AI14 798 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 RABEPKQ7Z6M1 372 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 SPATS2Q86XZ4 545 aaKnown RBP9.84□□□□□ -0.83
YBX3-212ENST00000542002 TEX26Q8N6G2 289 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 PPP1R16AQ96I34 528 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 ZNF599Q96NL3 588 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 TSGA13Q96PP4 275 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 LGMNQ99538 433 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 HERPUD2Q9BSE4 406 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 CINPQ9BW66 212 aaPredicted RBP9.84□□□□□ -0.83
YBX3-212ENST00000542002 OSBPL1AQ9BXW6 950 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 NOD2Q9HC29 1040 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 DYRK4Q9NR20 520 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 DNAAF2Q9NVR5 837 aaKnown RBP9.84□□□□□ -0.83
YBX3-212ENST00000542002 DKK3Q9UBP4 350 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 SEPT3Q9UH03 358 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 FNDC3AQ9Y2H6 1198 aaKnown RBP9.84□□□□□ -0.83
YBX3-212ENST00000542002 PCDHGC4Q9Y5F7 938 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 PCDH15Q96QU1 1955 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 SPEGQ15772 3267 aa9.84□□□□□ -0.83
YBX3-212ENST00000542002 NUP205Q92621 2012 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 NYNRINQ9P2P1 1898 aaKnown RBP9.83□□□□□ -0.84
YBX3-212ENST00000542002 TSPAN11A1L157 253 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 GRID2IPA4D2P6 1211 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 BTNL10A8MVZ5 291 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 ZNF487B1APH4 448 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 SPOPO43791 374 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 MMP20O60882 483 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 KRT1P04264 644 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 SYPP08247 313 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 SDHBP21912 280 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 CCNCP24863 283 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 CD38P28907 300 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 SERPINB6P35237 376 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 CTSKP43235 329 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 GRIA4P48058 902 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 PEX5P50542 639 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 VAV2P52735 878 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 RAD51Q06609 339 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 UGP2Q16851 508 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 ZFYVE27Q5T4F4 411 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 TMCO4Q5TGY1 634 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 MARC1Q5VT66 337 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 C11orf63Q6NUN7 778 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 DGLUCYQ7Z3D6 616 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 PIP4P1Q86T03 277 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 DAAM2Q86T65 1068 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 PRPF39Q86UA1 669 aaKnown RBP9.83□□□□□ -0.84
YBX3-212ENST00000542002 ATPAF2Q8N5M1 289 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 LRRC57Q8N9N7 239 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 TMEM145Q8NBT3 493 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 HCAR2Q8TDS4 363 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 MAML1Q92585 1016 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 ECHDC3Q96DC8 303 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 FEM1CQ96JP0 617 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 BMFQ96LC9 184 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 ZNF641Q96N77 438 aaPredicted RBP9.83□□□□□ -0.84
YBX3-212ENST00000542002 CAMK1GQ96NX5 476 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 KLF6Q99612 283 aaPredicted RBP9.83□□□□□ -0.84
YBX3-212ENST00000542002 MYOCQ99972 504 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 MGME1Q9BQP7 344 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 C1QTNF2Q9BXJ5 285 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 SLC17A9Q9BYT1 436 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 GAREM1Q9H706 876 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 NT5MQ9NPB1 228 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 PCDH12Q9NPG4 1184 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 AASDHPPTQ9NRN7 309 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 HEY1Q9Y5J3 304 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 CEP192Q8TEP8 1941 aa9.83□□□□□ -0.84
YBX3-212ENST00000542002 CEP250Q9BV73 2442 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 MED19A0JLT2 244 aaPredicted RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 POM121BA6NF01 834 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 PRAMEF26H0Y7S4 382 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 TLR4O00206 839 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 RIOK3O14730 519 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 MATN3O15232 486 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 PSTPIP1O43586 416 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 TSPAN6O43657 245 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 KCNK5O95279 499 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 CCNB1P14635 433 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 PECAM1P16284 738 aaPredicted RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 MMP13P45452 471 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 DYNLT1P63172 113 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 RPS21P63220 83 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 FAM193AP78312 1265 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 NIPAL4Q0D2K0 466 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 CCDC15Q0P6D6 951 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 TRAF2Q12933 501 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 HNRNPDQ14103 355 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 IFI16Q16666 785 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 TMEM52BQ4KMG9 183 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 SETMARQ53H47 684 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms