RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 PNPLA8Q9NP80 782 aa16.91■□□□□ 0.3
PDCD2-208ENST00000541970 ITGB1BP2Q9UKP3 347 aa16.91■□□□□ 0.3
PDCD2-208ENST00000541970 TNS1Q9HBL0 1735 aaKnown RBP16.9■□□□□ 0.3
PDCD2-208ENST00000541970 TMEM233B4DJY2 109 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 M0QZ92 97 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 CLOCKO15516 846 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 AVPR1AP37288 418 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 NME5P56597 212 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 WSCD1Q658N2 575 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 RWDD4Q6NW29 188 aaKnown RBP16.9■□□□□ 0.3
PDCD2-208ENST00000541970 CXCL17Q6UXB2 119 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 USP50Q70EL3 339 aaPredicted RBP16.9■□□□□ 0.3
PDCD2-208ENST00000541970 SAPCD2Q86UD0 394 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 SIGLEC10Q96LC7 697 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 RNF157Q96PX1 679 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 GATA5Q9BWX5 397 aaPredicted RBP16.9■□□□□ 0.3
PDCD2-208ENST00000541970 TASP1Q9H6P5 420 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 KCNH4Q9UQ05 1017 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 CNTN6Q9UQ52 1028 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 PCDHB12Q9Y5F1 795 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 PCDHA11Q9Y5I1 949 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 TRIM38O00635 465 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 MT-ND1P03886 318 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 JUNP05412 331 aaKnown RBP16.9■□□□□ 0.3
PDCD2-208ENST00000541970 SLC6A3Q01959 620 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 OLIG2Q13516 323 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 PID1Q7Z2X4 250 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 Q8N9G6 341 aaPredicted RBP16.9■□□□□ 0.3
PDCD2-208ENST00000541970 GAD1Q99259 594 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
PDCD2-208ENST00000541970 CYP3A43Q9HB55 503 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 SNX15Q9NRS6 342 aa16.9■□□□□ 0.3
PDCD2-208ENST00000541970 PROZP22891 400 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 PTPN7P35236 360 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 TPTEP56180 551 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 TXNL4AP83876 142 aaKnown RBP16.89■□□□□ 0.3
PDCD2-208ENST00000541970 STILQ15468 1287 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 CHSY3Q70JA7 882 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 IFNEQ86WN2 208 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 CCDC185Q8N715 623 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 PLD5Q8N7P1 536 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 ZC3H15Q8WU90 426 aaKnown RBP16.89■□□□□ 0.3
PDCD2-208ENST00000541970 STARD8Q92502 1023 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 LHX5Q9H2C1 402 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 ATP11BQ9Y2G3 1177 aa16.89■□□□□ 0.3
PDCD2-208ENST00000541970 C2CD4BA6NLJ0 364 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 TNPO2O14787 897 aaKnown RBP16.89■□□□□ 0.29
PDCD2-208ENST00000541970 TRIM13O60858 407 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 POMCP01189 267 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 CCNA2P20248 432 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 GARSP41250 739 aaKnown RBP16.89■□□□□ 0.29
PDCD2-208ENST00000541970 DUSP28Q4G0W2 176 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 HOMEZQ8IX15 550 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 SPATA6LQ8N4H0 392 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 PCDH19Q8TAB3 1148 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 ZNF597Q96LX8 424 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 TSNARE1Q96NA8 513 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 TBCBQ99426 244 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 BCO2Q9BYV7 579 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 SMOXQ9NWM0 555 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 ZNF229Q9UJW7 825 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 POU2F3Q9UKI9 436 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 CNOT6Q9ULM6 557 aaKnown RBP16.89■□□□□ 0.29
PDCD2-208ENST00000541970 A0A096LPK6 155 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 SMIM28A0A1B0GU29 152 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 DYTNA2CJ06 578 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 TK2O00142 265 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 MOCS2O96007 188 aaPredicted RBP16.89■□□□□ 0.29
PDCD2-208ENST00000541970 ATICP31939 592 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 RAD23AP54725 363 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 MFSD10Q14728 455 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 SOWAHAQ2M3V2 549 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 PARP8Q8N3A8 854 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 PBXIP1Q96AQ6 731 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 FRMD8P1Q9BZ68 369 aaPredicted RBP16.89■□□□□ 0.29
PDCD2-208ENST00000541970 KLHL8Q9P2G9 620 aaPredicted RBP16.89■□□□□ 0.29
PDCD2-208ENST00000541970 EGFL7Q9UHF1 273 aa16.89■□□□□ 0.29
PDCD2-208ENST00000541970 HDAC3O15379 428 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 BAIAP3O94812 1187 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 BOLA3Q53S33 107 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 ARL13AQ5H913 290 aaPredicted RBP16.88■□□□□ 0.29
PDCD2-208ENST00000541970 BTLAQ7Z6A9 289 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 PIGZQ86VD9 579 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 KIAA2013Q8IYS2 634 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 PQLC3Q8N755 202 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 CANT1Q8WVQ1 401 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 PARK7Q99497 189 aaKnown RBP16.88■□□□□ 0.29
PDCD2-208ENST00000541970 ADNPQ9H2P0 1102 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 TPK1Q9H3S4 243 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 EHD1Q9H4M9 534 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 POLE4Q9NR33 117 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 GIT1Q9Y2X7 761 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 ANKRD12Q6UB98 2062 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 NCAM1P13591 858 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
PDCD2-208ENST00000541970 KCNJ8Q15842 424 aa16.88■□□□□ 0.29
PDCD2-208ENST00000541970 AGKQ53H12 422 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms