RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SETMARQ53H47 684 aaPredicted RBP17.08■□□□□ 0.32
CD9-209ENST00000540891 CAMK1DQ8IU85 385 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 PLD5Q8N7P1 536 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 TMEM145Q8NBT3 493 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 TPCN2Q8NHX9 752 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 HCAR2Q8TDS4 363 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 LRRN4Q8WUT4 740 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.32
CD9-209ENST00000540891 TUBGCP5Q96RT8 1024 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 MGME1Q9BQP7 344 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 SUV39H2Q9H5I1 410 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 GAREM1Q9H706 876 aa17.08■□□□□ 0.32
CD9-209ENST00000540891 LUC7LQ9NQ29 371 aaKnown RBP17.08■□□□□ 0.32
CD9-209ENST00000540891 ASCC3Q8N3C0 2202 aaKnown RBP17.07■□□□□ 0.32
CD9-209ENST00000540891 PRAMEF26H0Y7S4 382 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 PJA2O43164 708 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 TNNT1P13805 278 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 MARCKSL1P49006 195 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 VAV2P52735 878 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 RPS21P63220 83 aaKnown RBP17.07■□□□□ 0.32
CD9-209ENST00000540891 GRM3Q14832 879 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 SLC9A4Q6AI14 798 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 KIAA1161Q6NSJ0 714 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 C11orf63Q6NUN7 778 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 IL27RAQ6UWB1 636 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 MFSD7Q6UXD7 560 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 ERMP1Q7Z2K6 904 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 ADAT2Q7Z6V5 191 aaKnown RBP17.07■□□□□ 0.32
CD9-209ENST00000540891 TTC7BQ86TV6 843 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 LRRC49Q8IUZ0 686 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 TEX26Q8N6G2 289 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 MAML1Q92585 1016 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 ECHDC3Q96DC8 303 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 ZNF641Q96N77 438 aaPredicted RBP17.07■□□□□ 0.32
CD9-209ENST00000540891 MYOCQ99972 504 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 FZD3Q9NPG1 666 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 DTLQ9NZJ0 730 aa17.07■□□□□ 0.32
CD9-209ENST00000540891 A0A0U1RQJ8 604 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 BTNL10A8MVZ5 291 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 UPK3BL1B0FP48 263 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 UPK3BL2E5RIL1 263 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 H0Y8X5 98 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 TRAFD1O14545 582 aaPredicted RBP17.06■□□□□ 0.32
CD9-209ENST00000540891 GIPC1O14908 333 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 PSTPIP1O43586 416 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 TSPAN6O43657 245 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 CER1O95813 267 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 HSPA9P38646 679 aaKnown RBP17.06■□□□□ 0.32
CD9-209ENST00000540891 MMP13P45452 471 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 SCNN1BP51168 640 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 RENBPP51606 427 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 NXPH1P58417 271 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 MAXP61244 160 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 ZNF235Q14590 738 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 TAZQ16635 292 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 ZNF423Q2M1K9 1284 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 PPM1JQ5JR12 505 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 PIP4P1Q86T03 277 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 MFSD2AQ8NA29 543 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 FEM1CQ96JP0 617 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 TSGA13Q96PP4 275 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 C1QTNF2Q9BXJ5 285 aa17.06■□□□□ 0.32
CD9-209ENST00000540891 DDX56Q9NY93 547 aaKnown RBP17.06■□□□□ 0.32
CD9-209ENST00000540891 MED19A0JLT2 244 aaPredicted RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 IGLON5A6NGN9 336 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 RAD51BO15315 384 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 KCNK5O95279 499 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 PAK4O96013 591 aaPredicted RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 PRKCGP05129 697 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 ZNF883P0CG24 379 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 CSRP1P21291 193 aaKnown RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 HNRNPA2B1P22626 353 aaKnown RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 CDKN2BP42772 138 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 C21orf59P57076 290 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 AP1S1P61966 158 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 SLC14A1Q13336 389 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 HNRNPDQ14103 355 aaKnown RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 IFI16Q16666 785 aaKnown RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 UGP2Q16851 508 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 PRAMEF14Q5SWL7 426 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 MARC1Q5VT66 337 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 GCNT7Q6ZNI0 430 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 IQCHQ86VS3 1027 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 SPATS2Q86XZ4 545 aaKnown RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 KRT35Q92764 455 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 FATE1Q969F0 183 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 HDAC11Q96DB2 347 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 NUDCD1Q96RS6 583 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 KLF6Q99612 283 aaPredicted RBP17.05■□□□□ 0.32
CD9-209ENST00000540891 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 SLC17A9Q9BYT1 436 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 ATP13A3Q9H7F0 1226 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 TM7SF3Q9NS93 570 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 TMEM131Q92545 1883 aa17.05■□□□□ 0.32
CD9-209ENST00000540891 CACNA1AO00555 2505 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 TLR4O00206 839 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 NEMP1O14524 444 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 APOL1O14791 398 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 MATN3O15232 486 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms