RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	TACR3	P29371	465 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	PTGER1	P34995	402 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	ZNF41	P51814	821 aa	Predicted RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	RAD23A	P54725	363 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	HDAC4	P56524	1084 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	TFCP2	Q12800	502 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	ITGAD	Q13349	1161 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CAMK2D	Q13557	499 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CDC37	Q16543	378 aa	Predicted RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	C15orf59	Q2T9L4	293 aa	Predicted RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	ASTE1	Q2TB18	679 aa	Predicted RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	AWAT1	Q58HT5	328 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	VWA5B1	Q5TIE3	1220 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	JADE1	Q6IE81	842 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CEP85	Q6P2H3	762 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	ZNF474	Q6S9Z5	364 aa	Predicted RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	DENND5B	Q6ZUT9	1274 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CYB5R4	Q7L1T6	521 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CHST3	Q7LGC8	479 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	PLPPR4	Q7Z2D5	763 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CCDC186	Q7Z3E2	898 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CCDC91	Q7Z6B0	441 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	TBC1D26	Q86UD7	250 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	WDR5B	Q86VZ2	330 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CCDC25	Q86WR0	208 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	THNSL1	Q8IYQ7	743 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CHCHD4	Q8N4Q1	142 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	PAQR4	Q8N4S7	273 aa	Predicted RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	TMCO5A	Q8N6Q1	288 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	ARL10	Q8N8L6	244 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785		Q8NFD4	153 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	OR52N4	Q8NGI2	321 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	NSMCE1	Q8WV22	266 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	SGCD	Q92629	289 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	ATOH1	Q92858	354 aa	Predicted RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	LENG9	Q96B70	501 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	PTER	Q96BW5	349 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	TMCO6	Q96DC7	493 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	ARHGEF26	Q96DR7	871 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	FRG2B	Q96QU4	278 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	PAFAH2	Q99487	392 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	BDH2	Q9BUT1	245 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	KIFC3	Q9BVG8	833 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CCDC106	Q9BWC9	280 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	HIPK3	Q9H422	1215 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	BPIFA1	Q9NP55	256 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	PARD6A	Q9NPB6	346 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	SLC2A4RG	Q9NR83	387 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	DECR2	Q9NUI1	292 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	SH3BP4	Q9P0V3	963 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	C5AR2	Q9P296	337 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	WDR35	Q9P2L0	1181 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CARD8	Q9Y2G2	431 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	CCL27	Q9Y4X3	112 aa		2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	LSM4	Q9Y4Z0	139 aa	Known RBP	2.8	□□□□□ -1.96
CARS2-223	ENST00000540785	MAST3	O60307	1309 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	AOX1	Q06278	1338 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CYP2D7	A0A087X1C5	515 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785		A0A0A0MQY5	61 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	TCRBV5S1A1T	A0A578	114 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	BICDL2	A1A5D9	508 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	URAD	A6NGE7	173 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	TRIM64	A6NGJ6	449 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	DDTL	A6NHG4	134 aa	Predicted RBP	2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	TRIM64B	A6NI03	449 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	FAM90A8P	A6NJQ4	464 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785		A6NL46	340 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	SMTNL1	A8MU46	457 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CDRT15L2	A8MXV6	281 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	NPIPB11	E5RHQ5	1161 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785		H3BQ06	376 aa	Predicted RBP	2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CHL1	O00533	1208 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	RRH	O14718	337 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	PSMA7	O14818	248 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	ADAMDEC1	O15204	470 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	ATP2C2	O75185	946 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	AVIL	O75366	819 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	PEX11B	O96011	259 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	ATP5B	P06576	529 aa	Known RBP	2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	HNRNPC	P07910	306 aa	Known RBP eCLIP	2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CCDC175	P0C221	793 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	FAM90A13P	P0C7W8	464 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	FAM90A24P	P0C7X0	464 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	DRD4	P21917	467 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CPT2	P23786	658 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	PON1	P27169	355 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CIITA	P33076	1130 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	MCM7	P33993	719 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	RFC1	P35251	1148 aa	Predicted RBP	2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	BUD31	P41223	144 aa	Predicted RBP	2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	AVPR1B	P47901	424 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CLCN3	P51790	818 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CLCN5	P51795	746 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	CLDN2	P57739	230 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	MRPS5	P82675	430 aa	Known RBP	2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	RBP5	P82980	135 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	SORD	Q00796	357 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	TFAP4	Q01664	338 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	TAP1	Q03518	808 aa		2.79	□□□□□ -1.96
CARS2-223	ENST00000540785	PLP2	Q04941	152 aa		2.79	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms