RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 INTS11Q5TA45 600 aaKnown RBP11.32□□□□□ -0.6
CPT1A-206ENST00000540367 LBX2Q6XYB7 198 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 RIOX2Q8IUF8 465 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF786Q8N393 782 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 OR2T34Q8NGX1 318 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 OR2T3Q8NH03 318 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 NT5C3BQ969T7 300 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 OMDQ99983 421 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 SLC25A23Q9BV35 468 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 KIFC1Q9BW19 673 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 MEAF6Q9HAF1 191 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 SMOXQ9NWM0 555 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 CCDC167Q9P0B6 97 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 COX16Q9P0S2 106 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 WDR37Q9Y2I8 494 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF711Q9Y462 761 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 NCAM2O15394 837 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 MTSS1O43312 755 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 GNAO1P09471 354 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 HSPA8P11142 646 aaKnown RBP11.32□□□□□ -0.6
CPT1A-206ENST00000540367 HNRNPLP14866 589 aaKnown RBP eCLIP11.32□□□□□ -0.6
CPT1A-206ENST00000540367 PORP16435 677 aaPredicted RBP11.32□□□□□ -0.6
CPT1A-206ENST00000540367 STMN1P16949 149 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 ERCC2P18074 760 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 GRM5P41594 1212 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 NAA20P61599 178 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 PFKPQ01813 784 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 TMEM62Q0P6H9 643 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 ZBTB17Q13105 803 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 MTA1Q13330 715 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 ANKDD1AQ495B1 522 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 LYSMD3Q7Z3D4 306 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 CEP97Q8IW35 865 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 AFAP1L2Q8N4X5 818 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 LRRC52Q8N7C0 313 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF420Q8TAQ5 688 aaPredicted RBP11.32□□□□□ -0.6
CPT1A-206ENST00000540367 CANT1Q8WVQ1 401 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 BORCS5Q969J3 196 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 NPY6RQ99463 290 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 MRPL57Q9BQC6 102 aaKnown RBP11.32□□□□□ -0.6
CPT1A-206ENST00000540367 SNX25Q9H3E2 840 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 ELP3Q9H9T3 547 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 TRHDEQ9UKU6 1024 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 FIS1Q9Y3D6 152 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 MCM3APO60318 1980 aa11.32□□□□□ -0.6
CPT1A-206ENST00000540367 FNDC1Q4ZHG4 1894 aaPredicted RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 FAM95CA0A1B0GW59 222 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CCDC78A2IDD5 438 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 M0QYT0 321 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 AP3B1O00203 1094 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 DLGAP1O14490 977 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 TSPAN1O60635 241 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SUPT3HO75486 399 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ARSAP15289 507 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ATP6V1B2P21281 511 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ATP5F1P24539 256 aaPredicted RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 LRPAP1P30533 357 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 NOS2P35228 1153 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 GRIA3P42263 894 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SLC7A2P52569 658 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SLC5A3P53794 718 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 NAPEPLDQ6IQ20 393 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CAMK1DQ8IU85 385 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CNTN4Q8IWV2 1026 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CRYBG2Q8N1P7 616 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 NDRG1Q92597 394 aaKnown RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 DOK1Q99704 481 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ADI1Q9BV57 179 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 NPLQ9BXD5 320 aaPredicted RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 MRM3Q9HC36 420 aaKnown RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SPON1Q9HCB6 807 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 DERAQ9Y315 318 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 TSC2P49815 1807 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 NRP2O60462 931 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ATE1O95260 518 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 IDO1P14902 403 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 DNAJB2P25686 324 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 TTKP33981 857 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 KPNA2P52292 529 aaKnown RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ADIGQ0VDE8 80 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SPIDRQ14159 915 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF829Q3KNS6 432 aaPredicted RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ERO1BQ86YB8 467 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 EPHX4Q8IUS5 362 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 MFSD6LQ8IWD5 586 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SPATA6LQ8N4H0 392 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CBR4Q8N4T8 237 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 FAM110BQ8TC76 370 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SLC2A14Q8TDB8 520 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 HDAC11Q96DB2 347 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms