RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SCN3BQ9NY72 215 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ETAA1Q9NY74 926 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 TRMT6Q9UJA5 497 aaKnown RBP10.08□□□□□ -0.8
TRAF1-202ENST00000540010 MOSPD1Q9UJG1 213 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ZSWIM8A7E2V4 1837 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 MGAMO43451 1857 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 TCRBV7S3A2A0A539 114 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF839A8K0R7 811 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 MPOP05164 745 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 KRT8P05787 483 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 OR4Q2P0C623 313 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 SERPINB1P30740 379 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 AKT1P31749 480 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 GRIA4P48058 902 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 BFSP2Q13515 415 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 MAPK11Q15759 364 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 ACSBG2Q5FVE4 666 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 LRRC8BQ6P9F7 803 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 PAQR9Q6ZVX9 377 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 UCMAQ8WVF2 138 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 SLC44A1Q8WWI5 657 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 KLHL25Q9H0H3 589 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 POMKQ9H5K3 350 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 NDUFAF1Q9Y375 327 aa10.08□□□□□ -0.8
TRAF1-202ENST00000540010 TMEM247A6NEH6 219 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 EVPLLA8MZ36 301 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 TP73O15350 636 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 RGS5O15539 181 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PRPF4O43172 522 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 H2AFYO75367 372 aaKnown RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 KATNA1O75449 491 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 MYO1DO94832 1006 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 TMCC1O94876 653 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 TMEM63AO94886 807 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 SP100P23497 879 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 CDK7P50613 346 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 NR6A1Q15406 480 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 RNF219Q5W0B1 726 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 DCP1BQ8IZD4 617 aaKnown RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 KCTD4Q8WVF5 259 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PIGVQ9NUD9 493 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 FZD10Q9ULW2 581 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 SLC12A4Q9UP95 1085 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PLLPQ9Y342 182 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF197O14709 1029 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PQBP1O60828 265 aaKnown RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 BPGMP07738 259 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 CDH2P19022 906 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 ATN1P54259 1190 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 EFEMP1Q12805 493 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 SLC9A4Q6AI14 798 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 CYP4V2Q6ZWL3 525 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 GPRIN1Q7Z2K8 1008 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 HS6ST3Q8IZP7 471 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 NAT8LQ8N9F0 302 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 SLAIN1Q8ND83 568 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 OR9Q1Q8NGQ5 310 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PGLYRP2Q96PD5 576 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 NDNQ99608 321 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 CHCHD3Q9NX63 227 aaKnown RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PCNTO95613 3336 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 ANKRD12Q6UB98 2062 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 HDAC3O15379 428 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 IL4RP24394 825 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 ADRA1BP35368 520 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 SCNN1BP51168 640 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PWP1Q13610 501 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 ZIK1Q3SY52 487 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 CCDC92Q53HC0 331 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 SPANXN3Q5MJ09 141 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 ZFP1Q6P2D0 407 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 C6orf89Q6UWU4 347 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 MAGEE2Q8TD90 523 aaPredicted RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 FAM50BQ9Y247 325 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 FAM32AQ9Y421 112 aaKnown RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 NR2E3Q9Y5X4 410 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 AP4B1Q9Y6B7 739 aa10.07□□□□□ -0.8
TRAF1-202ENST00000540010 PRRC2BQ5JSZ5 2229 aaKnown RBP10.07□□□□□ -0.8
TRAF1-202ENST00000540010 FAM95CA0A1B0GW59 222 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 MAGEB16A2A368 324 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 BCLAF3A2AJT9 711 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RGSL1A5PLK6 1076 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 F8W810 466 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF189O75820 626 aaPredicted RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 IGHA2P01877 340 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ITGB1P05556 798 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 RPL5P46777 297 aaKnown RBP10.06□□□□□ -0.8
TRAF1-202ENST00000540010 CAP1Q01518 475 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 MARC1Q5VT66 337 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 NEPROQ6NW34 567 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 B3GNT6Q6ZMB0 384 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 LRRC8DQ7L1W4 858 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 ARCQ7LC44 396 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 HEATR4Q86WZ0 1026 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 HORMAD1Q86X24 394 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 SLC41A1Q8IVJ1 513 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 NSMCE2Q96MF7 247 aa10.06□□□□□ -0.8
TRAF1-202ENST00000540010 TMEM209Q96SK2 561 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms