RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 MAPK8P45983 427 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 PPIDQ08752 370 aaKnown RBP13.58□□□□□ -0.24
PRPF19-204ENST00000539960 TRIM61Q5EBN2 209 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 TCEAL6Q6IPX3 200 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 PRPF39Q86UA1 669 aaKnown RBP13.58□□□□□ -0.24
PRPF19-204ENST00000539960 TRIM69Q86WT6 500 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 CAMK1DQ8IU85 385 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 CCDC13Q8IYE1 715 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 UBL4BQ8N7F7 174 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 C12orf50Q8NA57 414 aaPredicted RBP13.58□□□□□ -0.24
PRPF19-204ENST00000539960 TCEAL3Q969E4 200 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 FEM1CQ96JP0 617 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 PDLIM2Q96JY6 352 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 NSMCE3Q96MG7 304 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 OLFM3Q96PB7 478 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 NUDCD1Q96RS6 583 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 MGME1Q9BQP7 344 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 ORAI3Q9BRQ5 295 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 ATP13A3Q9H7F0 1226 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 NT5MQ9NPB1 228 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 RBM22Q9NW64 420 aaKnown RBP eCLIP13.58□□□□□ -0.243e-6■■■■■ 29.5
PRPF19-204ENST00000539960 SAE1Q9UBE0 346 aaPredicted RBP13.58□□□□□ -0.24
PRPF19-204ENST00000539960 AMACRQ9UHK6 382 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 PPP2R2CQ9Y2T4 447 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 FADS3Q9Y5Q0 445 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.58□□□□□ -0.24
PRPF19-204ENST00000539960 CAPN6Q9Y6Q1 641 aa13.58□□□□□ -0.24
PRPF19-204ENST00000539960 ATXN2Q99700 1313 aaKnown RBP13.58□□□□□ -0.24
PRPF19-204ENST00000539960 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
PRPF19-204ENST00000539960 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PRR5-ARHGAP8B1AHC4 643 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 AREL1O15033 823 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 RNGTTO60942 597 aaKnown RBP13.57□□□□□ -0.24
PRPF19-204ENST00000539960 GJB3O75712 270 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PCDH8O95206 1070 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 JCHAINP01591 159 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 CFIP05156 583 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PTMAP06454 111 aaKnown RBP13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PYGMP11217 842 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 TGM2P21980 687 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 CES1P23141 567 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 SERPINA4P29622 427 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PTPN7P35236 360 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 NUDT1P36639 197 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 ABL2P42684 1182 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 SUOXP51687 545 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 MAXP61244 160 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 AP1S1P61966 158 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PPP2CBP62714 309 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PPP2CAP67775 309 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 LMNB2Q03252 620 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 BCL2L1Q07817 233 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 RALGPS1Q5JS13 557 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 BRAT1Q6PJG6 821 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 BBS12Q6ZW61 710 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 P3H4Q92791 437 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 HES6Q96HZ4 224 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 NUSAP1Q9BXS6 441 aaKnown RBP13.57□□□□□ -0.24
PRPF19-204ENST00000539960 OSBPL8Q9BZF1 889 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 CAPN10Q9HC96 672 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 SCUBE2Q9NQ36 999 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 RXFP3Q9NSD7 469 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 PACSIN2Q9UNF0 486 aaPredicted RBP13.57□□□□□ -0.24
PRPF19-204ENST00000539960 SLCO1B1Q9Y6L6 691 aa13.57□□□□□ -0.24
PRPF19-204ENST00000539960 A0A1W2PQU0 124 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 TSPAN11A1L157 253 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 KCNK1O00180 336 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 TRAFD1O14545 582 aaPredicted RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 PPP1R12AO14974 1030 aaPredicted RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 DDX3YO15523 660 aaKnown RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 TSPAN6O43657 245 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 NEBLO76041 1014 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 PECAM1P16284 738 aaPredicted RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 XPAP23025 273 aaPredicted RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 MAT2AP31153 395 aaKnown RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 RPS21P63220 83 aaKnown RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 IFI35P80217 286 aaPredicted RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 ARHGAP8P85298 464 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 ITKQ08881 620 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 AP1B1Q10567 949 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 UGP2Q16851 508 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 ZNF284Q2VY69 593 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 HORMAD1Q86X24 394 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 ZCCHC9Q8N567 271 aaKnown RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 ECHDC3Q96DC8 303 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 IL12RB2Q99665 862 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 SEMA3CQ99985 751 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 TM9SF3Q9HD45 589 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 HAUS2Q9NVX0 235 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 ZFR2Q9UPR6 939 aaKnown RBP13.56□□□□□ -0.24
PRPF19-204ENST00000539960 DMTF1Q9Y222 760 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 PCDHGC4Q9Y5F7 938 aa13.56□□□□□ -0.24
PRPF19-204ENST00000539960 LNP1A1A4G5 178 aa13.55□□□□□ -0.24
PRPF19-204ENST00000539960 NEMP1O14524 444 aa13.55□□□□□ -0.24
PRPF19-204ENST00000539960 HTRA2O43464 458 aaPredicted RBP13.55□□□□□ -0.24
PRPF19-204ENST00000539960 GDF9O60383 454 aa13.55□□□□□ -0.24
PRPF19-204ENST00000539960 TJP3O95049 919 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms