RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PCBP4P57723 403 aaKnown RBP15.49■□□□□ 0.07
UBE3B-211ENST00000539843 PTP4A2Q12974 167 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 FGL2Q14314 439 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 NR0B2Q15466 257 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 RAB6CQ53S08 254 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 ESRP1Q6NXG1 681 aaKnown RBP15.49■□□□□ 0.07
UBE3B-211ENST00000539843 ZNF248Q8NDW4 579 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 WDR48Q8TAF3 677 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 HCAR2Q8TDS4 363 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 NAT6Q93015 286 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 TBATAQ96M53 351 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 RAB6CQ9H0N0 254 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 FZD10Q9ULW2 581 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 ITM2BQ9Y287 266 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 MFHAS1Q9Y4C4 1052 aa15.49■□□□□ 0.07
UBE3B-211ENST00000539843 DOCK4Q8N1I0 1966 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 ARHGAP42A6NI28 874 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 WASH4PA8MWX3 477 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 ZZEF1O43149 2961 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 MMP20O60882 483 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 CSO75390 466 aaKnown RBP15.48■□□□□ 0.07
UBE3B-211ENST00000539843 PFN3P60673 137 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 PPARDQ03181 441 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 CDKN3Q16667 212 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 FILIP1LQ4L180 1135 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 SOWAHCQ53LP3 525 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-211ENST00000539843 ARTNQ5T4W7 220 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 FAXCQ5TGI0 409 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 ACAD10Q6JQN1 1059 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 MACC1Q6ZN28 852 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 PHACTR4Q8IZ21 702 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 UMODL1-AS1Q8N2C9 162 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 FSTL5Q8N475 847 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-211ENST00000539843 HMCESQ96FZ2 354 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 VCPIP1Q96JH7 1222 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 KLF6Q99612 283 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-211ENST00000539843 CPEB1Q9BZB8 566 aaKnown RBP15.48■□□□□ 0.07
UBE3B-211ENST00000539843 THSD1Q9NS62 852 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 PARVAQ9NVD7 372 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 MYO6Q9UM54 1294 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 NEU3Q9UQ49 428 aa15.48■□□□□ 0.07
UBE3B-211ENST00000539843 EEF2KO00418 725 aaKnown RBP15.47■□□□□ 0.07
UBE3B-211ENST00000539843 AREL1O15033 823 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 TLX3O43711 291 aaPredicted RBP15.47■□□□□ 0.07
UBE3B-211ENST00000539843 USP12O75317 370 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 RNF8O76064 485 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 ALPIP09923 528 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 CTSEP14091 401 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 PSMA2P25787 234 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 RBMS1P29558 406 aaKnown RBP15.47■□□□□ 0.07
UBE3B-211ENST00000539843 NDST2P52849 883 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 UCNP55089 124 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 GABREP78334 506 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 CCDC173Q0VFZ6 552 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 SERINC3Q13530 473 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 LRRC14Q15048 493 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 KLHL40Q2TBA0 621 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 DEFB133Q30KQ1 61 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 PRRT3Q5FWE3 981 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 CCDC183Q5T5S1 534 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 BRAT1Q6PJG6 821 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 EFL1Q7Z2Z2 1120 aaKnown RBP15.47■□□□□ 0.07
UBE3B-211ENST00000539843 MCOLN2Q8IZK6 566 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 PYROXD2Q8N2H3 581 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 ZNF641Q96N77 438 aaPredicted RBP15.47■□□□□ 0.07
UBE3B-211ENST00000539843 FCRL3Q96P31 734 aaPredicted RBP15.47■□□□□ 0.07
UBE3B-211ENST00000539843 WRAP53Q9BUR4 548 aaKnown RBP15.47■□□□□ 0.07
UBE3B-211ENST00000539843 TRPM6Q9BX84 2022 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 POLR1BQ9H9Y6 1135 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 SP110Q9HB58 689 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 GGT7Q9UJ14 662 aa15.47■□□□□ 0.07
UBE3B-211ENST00000539843 LRRC10BA6NIK2 292 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 LZTS3O60299 673 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 TCEA3O75764 348 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 GIMD1P0DJR0 217 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 NFKBIAP25963 317 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 SERPINA4P29622 427 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 EIF4A3P38919 411 aaKnown RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 PEX5P50542 639 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 ZNF135P52742 658 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 ADKP55263 362 aaKnown RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 ERVPABLB-1P60509 514 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 RPL7AP62424 266 aaKnown RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 ELOCQ15369 112 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 LRRC73Q5JTD7 316 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 CDCP2Q5VXM1 449 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 RBM44Q6ZP01 1051 aaKnown RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 CENPTQ96BT3 561 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 TUBGCP5Q96RT8 1024 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 CINPQ9BW66 212 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 SUV39H2Q9H5I1 410 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 DHX35Q9H5Z1 703 aaKnown RBP15.46■□□□□ 0.07
UBE3B-211ENST00000539843 ATP13A3Q9H7F0 1226 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 SYNDIG1Q9H7V2 258 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 AP4E1Q9UPM8 1137 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 PCDHB1Q9Y5F3 818 aa15.46■□□□□ 0.07
UBE3B-211ENST00000539843 DMXL2Q8TDJ6 3036 aa15.46■□□□□ 0.06
UBE3B-211ENST00000539843 SPEGQ15772 3267 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms