RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 DNMT3BQ9UBC3 853 aaKnown RBP22.66■■□□□ 1.22
HOMER3-204ENST00000539827 VPS28Q9UK41 221 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 KCTD3Q9Y597 815 aa22.66■■□□□ 1.22
HOMER3-204ENST00000539827 EDF1O60869 148 aaKnown RBP22.65■■□□□ 1.22
HOMER3-204ENST00000539827 ZMPSTE24O75844 475 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 SERPINB8P50452 374 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 GRM3Q14832 879 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 TEAD2Q15562 447 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 MFN1Q8IWA4 741 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 VPS39Q96JC1 886 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 MCMBPQ9BTE3 642 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 GGT7Q9UJ14 662 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 ZNF510Q9Y2H8 683 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 INSIG1O15503 277 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 CLASP2O75122 1294 aaKnown RBP22.65■■□□□ 1.22
HOMER3-204ENST00000539827 AHSGP02765 367 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 PTPN2P17706 415 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 GABRB3P28472 473 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 UBE3AQ05086 875 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 ITIH4Q14624 930 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 RNF187Q5TA31 235 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-204ENST00000539827 FAM109BQ6ICB4 259 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-204ENST00000539827 ANKS4BQ8N8V4 417 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 CCL26Q9Y258 94 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 CHKBQ9Y259 395 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 OR51B4Q9Y5P0 310 aa22.65■■□□□ 1.22
HOMER3-204ENST00000539827 CCL22O00626 93 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 TIMM44O43615 452 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 MOSPD3O75425 235 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 TMCC1O94876 653 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 PIRTP0C851 137 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 CR2P20023 1033 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 HLA-DPA1P20036 260 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 DLG2Q15700 870 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 N4BP2L1Q5TBK1 243 aaPredicted RBP22.64■■□□□ 1.21
HOMER3-204ENST00000539827 ZC3HC1Q86WB0 502 aaKnown RBP22.64■■□□□ 1.21
HOMER3-204ENST00000539827 CNTN4Q8IWV2 1026 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 BLOC1S5Q8TDH9 187 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 SH3RF2Q8TEC5 729 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 CLEC4EQ9ULY5 219 aa22.64■■□□□ 1.21
HOMER3-204ENST00000539827 C5orf67F2Z3F1 127 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 PER2O15055 1255 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 GLRA3O75311 464 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 FGF1P05230 155 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 SLC1A2P43004 574 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 MAGEA12P43365 314 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 NTHL1P78549 312 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 C9orf50Q5SZB4 431 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 ZNF697Q5TEC3 545 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 OTOAQ7RTW8 1153 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 APCDD1Q8J025 514 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 CPXM2Q8N436 756 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 CCDC63Q8NA47 563 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 ISL2Q96A47 359 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 GRAMD1AQ96CP6 724 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 ALG14Q96F25 216 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 TRIB3Q96RU7 358 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 VPS51Q9UID3 782 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 EMCNQ9ULC0 261 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 SLC39A10Q9ULF5 831 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 RRP15Q9Y3B9 282 aaKnown RBP22.63■■□□□ 1.21
HOMER3-204ENST00000539827 BUD23O43709 281 aaKnown RBP22.63■■□□□ 1.21
HOMER3-204ENST00000539827 KIAA0754O94854 1291 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 NDST3O95803 873 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 EPOP01588 193 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 RHOP08100 348 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 SAT1P21673 171 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 MPPE1Q53F39 396 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 NEPROQ6NW34 567 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 OR13J1Q8NGT2 312 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 RHOJQ9H4E5 214 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 ZNF358Q9NW07 568 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 DCDC2Q9UHG0 476 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 ARHGAP26Q9UNA1 814 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 STARD13Q9Y3M8 1113 aa22.63■■□□□ 1.21
HOMER3-204ENST00000539827 MROH6A6NGR9 719 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 LDB2O43679 373 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 EPHA5P54756 1037 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 TMPRSS15P98073 1019 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 PTPRCAPQ14761 206 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 SLC5A9Q2M3M2 681 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 ZNF470Q6ECI4 717 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 NUDCD1Q96RS6 583 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 FAM167BQ9BTA0 163 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 LHX3Q9UBR4 397 aa22.62■■□□□ 1.21
HOMER3-204ENST00000539827 FCF1Q9Y324 198 aaKnown RBP22.62■■□□□ 1.21
HOMER3-204ENST00000539827 CCDC195A0A1B0GUA6 201 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 SIN3BO75182 1162 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 PAPSS2O95340 614 aaPredicted RBP22.61■■□□□ 1.21
HOMER3-204ENST00000539827 CA3P07451 260 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 ARSDP51689 593 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 PGGT1BP53609 377 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 IRF9Q00978 393 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 COL13A1Q5TAT6 717 aaPredicted RBP22.61■■□□□ 1.21
HOMER3-204ENST00000539827 SRLQ86TD4 932 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 NUDCD3Q8IVD9 361 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 SLC41A1Q8IVJ1 513 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 CMTM8Q8IZV2 173 aa22.61■■□□□ 1.21
HOMER3-204ENST00000539827 C2CD4AQ8NCU7 369 aaPredicted RBP22.61■■□□□ 1.21
HOMER3-204ENST00000539827 RIN3Q8TB24 985 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms