RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 OR6B1O95007 311 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SCNN1GP51170 649 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ATP6V0D1P61421 351 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 FMO1Q01740 532 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 TAF13Q15543 124 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PDK4Q16654 411 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CXCL17Q6UXB2 119 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PIWIL4Q7Z3Z4 852 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 REM2Q8IYK8 340 aaPredicted RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 RBFAQ8N0V3 343 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 OR52L1Q8NGH7 329 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 RACGAP1Q9H0H5 632 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SLC27A6Q9Y2P4 619 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 POLR1DQ9Y2S0 133 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 RAP2CQ9Y3L5 183 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 AVILO75366 819 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 HGFP14210 728 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 AMD1P17707 334 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 NFKB1P19838 968 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 RPL22P35268 128 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CCR3P51677 355 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 BNIP2Q12982 314 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 BIKQ13323 160 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 LSM12Q3MHD2 195 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ANXA8L1Q5VT79 327 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ZCCHC23Q6ZST2 131 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 DET1Q7L5Y6 550 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SPATA19Q7Z5L4 167 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 TCAIMQ8N3R3 496 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 FIBCD1Q8N539 461 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 HDAC7Q8WUI4 952 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ELMO3Q96BJ8 720 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 MPP4Q96JB8 637 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF184Q99676 751 aaPredicted RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SMAD5Q99717 465 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 EBNA1BP2Q99848 306 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ST3GAL5Q9UNP4 418 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF780BQ9Y6R6 833 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PARNO95453 639 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 FGF1P05230 155 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 IL6P05231 212 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ITGB3BPQ13352 177 aaPredicted RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 GPRIN3Q6ZVF9 776 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 KAT5Q92993 513 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ART4Q93070 314 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ROGDIQ9GZN7 287 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 KIAA1522Q9P206 1035 aaPredicted RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 DAPK2Q9UIK4 370 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 hCG_1818297A0A087WSY0 165 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 C1orf232A0A0U1RR37 186 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PIPSLA2A3N6 862 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 A8MX80 341 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 OR10H2O60403 315 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 USP12O75317 370 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ADRB2P07550 413 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 MRPS5P82675 430 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CAPSQ13938 189 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 C9orf57Q5W0N0 161 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 S100A13Q99584 98 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 FAM105AQ9NUU6 356 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PRPF19Q9UMS4 504 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SLC25A12O75746 678 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ECDO95905 644 aaPredicted RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PPIBP23284 216 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 FLT3P36888 993 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CRATP43155 626 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 NOMO3P69849 1222 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 GPAT3Q53EU6 434 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 RAET1GQ6H3X3 334 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 BNIPLQ7Z465 357 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 MON1AQ86VX9 555 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ZCCHC7Q8N3Z6 543 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 RP9Q8TA86 221 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 OR8D1Q8WZ84 308 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SHC3Q92529 594 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 FBXO6Q9NRD1 293 aaPredicted RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 MRPL39Q9NYK5 338 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ARMCX1Q9P291 453 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 MRPS23Q9Y3D9 190 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 BAZ2AQ9UIF9 1905 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 LINC00854A0A1B0GVQ3 168 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 GJB6O95452 261 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SERPINA6P08185 405 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 EPORP19235 508 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CTNNB1P35222 781 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ARMC3Q5W041 872 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PIGZQ86VD9 579 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CORO1BQ9BR76 489 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PTGES3LE9PB15 166 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 KLRC4O43908 158 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 SNAP91O60641 907 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ADH1CP00326 375 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 TFEBP19484 476 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CDC25CP30307 473 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 IRGCQ6NXR0 463 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 OR4L1Q8NH43 312 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PTCD2Q8WV60 388 aaKnown RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 CXorf40BQ96DE9 158 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 TBCDQ9BTW9 1192 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms