RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 AGAP3Q96P47 875 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 CYTH2Q99418 400 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 PAFAH2Q99487 392 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 TSC22D3Q99576 134 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 BRINP2Q9C0B6 783 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 MAGEH1Q9H213 219 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 S1PR5Q9H228 398 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 LRMDAQ9H2I8 198 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 LRRC40Q9H9A6 602 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 RNPEPL1Q9HAU8 725 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 PDFQ9HBH1 243 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 TDP1Q9NUW8 608 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 CLDND1Q9NY35 253 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 CFAP97Q9P2B7 532 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 PRKAG3Q9UGI9 489 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 ZC3H7BQ9UGR2 993 aaKnown RBP8.96□□□□□ -0.97
DDB1-213ENST00000539332 LSM7Q9UK45 103 aaKnown RBP8.96□□□□□ -0.97
DDB1-213ENST00000539332 A0A1B0GVM2 712 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 TCAF2A6NFQ2 919 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 SDR42E2A6NKP2 422 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 FAM159BA6NKW6 160 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 AP3B1O00203 1094 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 LEFTY2O00292 366 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 PRAMEF11O60813 436 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 CLDN11O75508 207 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ANXA9O76027 345 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 KRT16P08779 473 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ACADSP16219 412 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ATP6V1C1P21283 382 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 CALB2P22676 271 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ADRA1AP35348 466 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ABL2P42684 1182 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 RENBPP51606 427 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 SH3BGRP55822 239 aaPredicted RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 MTM1Q13496 603 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 EFTUD2Q15029 972 aaKnown RBP eCLIP8.96□□□□□ -0.984e-7■■■■■ 30
DDB1-213ENST00000539332 ALG1LQ6GMV1 187 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 CES5AQ6NT32 575 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 KDELC1Q6UW63 502 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 HTR3DQ70Z44 454 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 CIR1Q86X95 450 aaPredicted RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 ARID3BQ8IVW6 561 aaPredicted RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 MPP5Q8N3R9 675 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ENDOVQ8N8Q3 282 aaKnown RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 SPDYE1Q8NFV5 336 aaPredicted RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 GSDMBQ8TAX9 411 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 SH3RF2Q8TEC5 729 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 FGF13Q92913 245 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ARHGEF2Q92974 986 aaKnown RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 PABPC5Q96DU9 382 aaKnown RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 DTNBP1Q96EV8 351 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 MAGEB18Q96M61 343 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ZNF599Q96NL3 588 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 GAS2L1Q99501 681 aaPredicted RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 DDX50Q9BQ39 737 aaKnown RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 MFRPQ9BY79 579 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 IRF2BPLQ9H1B7 796 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 MOCS1Q9NZB8 636 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 SENP1Q9P0U3 644 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 ZNF180Q9UJW8 692 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 FBXO9Q9UK97 447 aaPredicted RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 TBC1D30Q9Y2I9 924 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 AAR2Q9Y312 384 aaKnown RBP8.96□□□□□ -0.98
DDB1-213ENST00000539332 SH3BP1Q9Y3L3 701 aa8.96□□□□□ -0.98
DDB1-213ENST00000539332 E2F8A0AVK6 867 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 ILVBLA1L0T0 632 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 TCP11X1B4DZS4 312 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 F5H423 210 aaPredicted RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 J3KR12 359 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 DCTN3O75935 186 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 PGAM1P18669 254 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 OR1E1P30953 314 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 PEX19P40855 299 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 SGSHP51688 502 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 GEMP55040 296 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 RPS24P62847 133 aaKnown RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 NAB1Q13506 487 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 PRPSAP1Q14558 356 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 POLD3Q15054 466 aaPredicted RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 KBTBD12Q3ZCT8 623 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 ATAT1Q5SQI0 421 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 CWF19L1Q69YN2 538 aaKnown RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 NAPEPLDQ6IQ20 393 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 ZNF783Q6ZMS7 281 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 CAPN12Q6ZSI9 719 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 GET4Q7L5D6 327 aaPredicted RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 OTOP3Q7RTS5 596 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 LINC00523Q86TU6 105 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 SETD3Q86TU7 594 aaPredicted RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 BBS7Q8IWZ6 715 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.95□□□□□ -0.987e-7■■■□□ 19
DDB1-213ENST00000539332 CFAP52Q8N1V2 620 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 CPXM2Q8N436 756 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 RIN3Q8TB24 985 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 TTC17Q96AE7 1141 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 IMP4Q96G21 291 aaKnown RBP8.95□□□□□ -0.98
DDB1-213ENST00000539332 CFAP36Q96G28 342 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 MSLNLQ96KJ4 702 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 SLC25A51Q9H1U9 297 aa8.95□□□□□ -0.98
DDB1-213ENST00000539332 ATP13A1Q9HD20 1204 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms