RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PCSK4Q6UW60 755 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 GCNT7Q6ZNI0 430 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 C15orf39Q6ZRI6 1047 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF627Q7L945 461 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SFTPA2Q8IWL1 248 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TTC30BQ8N4P2 665 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 WDTC1Q8N5D0 677 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SEMA6DQ8NFY4 1073 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 OSCP1Q8WVF1 389 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TEKT4Q8WW24 435 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 KCNJ9Q92806 393 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ARRDC3Q96B67 414 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 REPS1Q96D71 796 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 GPR78Q96P69 363 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SMC6Q96SB8 1091 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 H2AFJQ9BTM1 129 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 KIFC3Q9BVG8 833 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 C1QTNF7Q9BXJ2 289 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 BRD8Q9H0E9 1235 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 INTS2Q9H0H0 1204 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MTMR10Q9NXD2 777 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TFCP2L1Q9NZI6 479 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 STK26Q9P289 416 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ABI3Q9P2A4 366 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TRIM10Q9UDY6 481 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SERGEFQ9UGK8 458 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 DDX25Q9UHL0 483 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 AMFRQ9UKV5 643 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CORO1CQ9ULV4 474 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CAPN7Q9Y6W3 813 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 EIF4G1Q04637 1599 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 WDR17Q8IZU2 1322 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RSF1Q96T23 1441 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ARHGEF11O15085 1522 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ARHGEF40Q8TER5 1519 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CLRN2A0PK11 232 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PABPN1LA6NDY0 278 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 FAM90A8PA6NJQ4 464 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 H0YIZ8 118 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 UBE2Q2LH0YL09 131 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 K7ESM1 405 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 FOXN1O15353 648 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 P4HA2O15460 535 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CDKL5O76039 1030 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RFPL3SP0C7P2 107 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 FAM90A13PP0C7W8 464 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 FAM90A24PP0C7X0 464 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 APEHP13798 732 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ENGP17813 658 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 NR2F2P24468 414 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CASP3P42574 277 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RAD52P43351 418 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MRPS34P82930 218 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 HOXA4Q00056 320 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 DDR1Q08345 913 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PTPN14Q15678 1187 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RPE65Q16518 533 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 DPCR1Q3MIW9 517 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF569Q5MCW4 686 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 HECTD3Q5T447 861 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 FAM69AQ5T7M9 428 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PMS2CLQ68D20 193 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 C8orf82Q6P1X6 216 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 FBXO46Q6PJ61 603 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 KIRREL2Q6UWL6 708 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RBPMS2Q6ZRY4 209 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MDGA2Q7Z553 956 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 BCDIN3DQ7Z5W3 292 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MRPL10Q7Z7H8 261 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ARHGEF25Q86VW2 580 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ADGRG3Q86Y34 549 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 RBFAQ8N0V3 343 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 LCORLQ8N3X6 602 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SLC38A9Q8NBW4 561 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PSMA8Q8TAA3 256 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 METTL6Q8TCB7 284 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 GPT2Q8TD30 523 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 XAGE5Q8WWM1 108 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SECISBP2LQ93073 1101 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 CEP295NLQ96MC4 621 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 PI4K2AQ9BTU6 479 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 MOV10L1Q9BXT6 1211 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SEZ6LQ9BYH1 1024 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 TTC12Q9H892 705 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 EHD2Q9NZN4 543 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 UPB1Q9UBR1 384 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ADD3Q9UEY8 706 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ACSL5Q9ULC5 683 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 SLC12A4Q9UP95 1085 aa1.11□□□□□ -2.23
HIF1A-204ENST00000539097 COPG1Q9Y678 874 aaKnown RBP1.11□□□□□ -2.23
HIF1A-204ENST00000539097 ATXN2Q99700 1313 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 A0A096LPK6 155 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KIR2DS5A0A0G2JLQ3 304 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 A0A1W2PPC1 479 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KIR2DS3K7RE56 304 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PEX12O00623 359 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FYB1O15117 783 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PAGE4O60829 102 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 NDUFS3O75489 264 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms