RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 IGSF6O95976 241 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 MPOP05164 745 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 ZNF143P52747 638 aaPredicted RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 RHOAP61586 193 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 GABREP78334 506 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 TLE3Q04726 772 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 CCDC173Q0VFZ6 552 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 CDKN3Q16667 212 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 DEFB133Q30KQ1 61 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 INO80DQ53TQ3 878 aaPredicted RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 PPP1R15BQ5SWA1 713 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 GUSBP11Q6P575 273 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 VPS36Q86VN1 386 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 ZNF354CQ86Y25 554 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 SPACA3Q8IXA5 215 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 RBFAQ8N0V3 343 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 NEK11Q8NG66 645 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 LMX1AQ8TE12 382 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 BTN2A2Q8WVV5 523 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 HMCESQ96FZ2 354 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 HIC2Q96JB3 615 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 ZNF578Q96N58 590 aaPredicted RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 MCEEQ96PE7 176 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 ABCG4Q9H172 646 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 TCEAL2Q9H3H9 227 aaPredicted RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 LHX3Q9UBR4 397 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 APOBEC3BQ9UH17 382 aaKnown RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 LIMA1Q9UHB6 759 aaKnown RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 SALL4Q9UJQ4 1053 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 PNMA8BQ9ULN7 279 aaPredicted RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 MFHAS1Q9Y4C4 1052 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 KNTC1P50748 2209 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 TRPM6Q9BX84 2022 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 COL27A1Q8IZC6 1860 aaPredicted RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 EME2A4GXA9 379 aaPredicted RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 WASH4PA8MWX3 477 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 RASA4BC9J798 803 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 TPP1O14773 563 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 RASA4O43374 803 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 MMP20O60882 483 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 USP12O75317 370 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 TM7SF2O76062 418 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 ITIH2P19823 946 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 TGM2P21980 687 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 THOP1P52888 689 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 AIF1P55008 147 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 PCBP4P57723 403 aaKnown RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 YBEYP58557 167 aaPredicted RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 RPL7AP62424 266 aaKnown RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 CFHR1Q03591 330 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 RAD51Q06609 339 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 SERINC3Q13530 473 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 PTK2BQ14289 1009 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 PARP15Q460N3 678 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 SCYL2Q6P3W7 929 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 MACC1Q6ZN28 852 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 EFL1Q7Z2Z2 1120 aaKnown RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 TTC7BQ86TV6 843 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 PHACTR4Q8IZ21 702 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 TP53I13Q8NBR0 393 aaPredicted RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 ZNF248Q8NDW4 579 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 CXorf40AQ8TE69 158 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 TBATAQ96M53 351 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 LGMNQ99538 433 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 IL12RB2Q99665 862 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 EPAS1Q99814 870 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 AGPAT1Q99943 283 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 LRRC61Q9BV99 259 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 BOCQ9BWV1 1114 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 C1QTNF7Q9BXJ2 289 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 POLR1BQ9H9Y6 1135 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 MBNL1Q9NR56 388 aaKnown RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
VAMP1-206ENST00000538970 SPASTQ9UBP0 616 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 FZD10Q9ULW2 581 aa12.66□□□□□ -0.38
VAMP1-206ENST00000538970 CPED1A4D0V7 1026 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 ANKRD62A6NC57 917 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 TOR1BO14657 336 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 INSIG1O15503 277 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 FGF10O15520 208 aaPredicted RBP12.65□□□□□ -0.38
VAMP1-206ENST00000538970 CREB3O43889 395 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 GCATO75600 419 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 TIMP2P16035 220 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 LSSP48449 732 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 YPEL5P62699 121 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 MYL5Q02045 173 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 NR0B2Q15466 257 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 ISXQ2M1V0 245 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 KLHL40Q2TBA0 621 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 PRRT3Q5FWE3 981 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 LSMEM2Q8N112 164 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 LSM14AQ8ND56 463 aaKnown RBP12.65□□□□□ -0.38
VAMP1-206ENST00000538970 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 EXOC2Q96KP1 924 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms