RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 UGGT1Q9NYU2 1555 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 LRRC14BA6NHZ5 514 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CENPBD1B2RD01 187 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 MAGEB2O15479 319 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 FMO3P31513 532 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PKN1Q16512 942 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ARCQ7LC44 396 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 MED8Q96G25 268 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CATSPERBQ9H7T0 1116 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 DNAJC18Q9H819 358 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ADAMTS12P58397 1594 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 MYL4P12829 197 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 IGFBP5P24593 272 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ALDH9A1P49189 494 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 MYBPC1Q00872 1141 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF423Q2M1K9 1284 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 NADK2Q4G0N4 442 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SPANXN3Q5MJ09 141 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 DPP9Q86TI2 863 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 P2RY8Q86VZ1 359 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ANKRD13AQ8IZ07 590 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PPM1MQ96MI6 270 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 GAD1Q99259 594 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 AS3MTQ9HBK9 375 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PRDM5Q9NQX1 630 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 KCNH1O95259 989 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SERPINA3P01011 423 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PENKP01210 267 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 EPHA3P29320 983 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 IFNGR2P38484 337 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 MEA1Q16626 185 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 FBXO39Q8N4B4 442 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF615Q8N8J6 731 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PNPT1Q8TCS8 783 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 C1QTNF1Q9BXJ1 281 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CDHR5Q9HBB8 845 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SMPD3Q9NY59 655 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CASKO14936 926 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 AKAP3O75969 853 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 HTR2BP41595 481 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PDK2Q15119 407 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 MED22Q15528 200 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 MFSD5Q6N075 450 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 TMCO6Q96DC7 493 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 FARSBQ9NSD9 589 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SACM1LQ9NTJ5 587 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 VPS51Q9UID3 782 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 RCCD1A6NED2 376 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 EDF1O60869 148 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PAICSP22234 425 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 FOXN2P32314 431 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SPIBQ01892 262 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PIGWQ7Z7B1 504 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 RXFP2Q8WXD0 754 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 RBM4BQ9BQ04 359 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 RBM4Q9BWF3 364 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 CLPBQ9H078 707 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 C2orf40Q9H1Z8 148 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 NMRK2Q9NPI5 230 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PNPOQ9NVS9 261 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 AKAP7Q9P0M2 348 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF232Q9UNY5 417 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 REXO2Q9Y3B8 237 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 RAD54BQ9Y620 910 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 TPH1P17752 444 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 TCEA1P23193 301 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 NKX2-5P52952 324 aaPredicted RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 S100A12P80511 92 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 BNIP3Q12983 259 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SUZ12Q15022 739 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 WDR72Q3MJ13 1102 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 PLA2G4FQ68DD2 849 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 TRABD2AQ86V40 505 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 GPSM1Q86YR5 675 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 ETNPPLQ8TBG4 499 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 SLC38A2Q96QD8 506 aa5.71□□□□□ -1.5
CSMD1-215ENST00000537824 STN1Q9H668 368 aaKnown RBP5.71□□□□□ -1.5
CSMD1-215ENST00000537824 G3V2T6 193 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CD40LGP29965 261 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ORC1Q13415 861 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CAMK1Q14012 370 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 STRIP1Q5VSL9 837 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ANKRD26P1Q6NSI1 321 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TNS4Q8IZW8 715 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 FNDC8Q8TC99 324 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 ATL1Q8WXF7 558 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MAFIPQ8WZ33 124 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 C11orf24Q96F05 449 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-215ENST00000537824 OR2B2Q9GZK3 357 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TAS2R1Q9NYW7 299 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 NCANO14594 1321 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SMCO3A2RU48 225 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 SH3BGRLO75368 114 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 GNAO1P09471 354 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 CRADDP78560 199 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 DLG1Q12959 904 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 MAB21L1Q13394 359 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 TNFAIP1Q13829 316 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 METTL21CQ5VZV1 264 aa5.7□□□□□ -1.5
CSMD1-215ENST00000537824 DUPD1Q68J44 220 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms