RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 LOC285095A0A1B0GVY8 99 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 ADAM12O43184 909 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 SLC7A4O43246 635 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 MAGEC1O60732 1142 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 PARNO95453 639 aaKnown RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 ANP32DO95626 131 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 CXCL10P02778 98 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 GM2AP17900 193 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 TAS2R39P59534 338 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 BBS5Q8N3I7 341 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 FSTL5Q8N475 847 aaPredicted RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 TMEM151AQ8N4L1 468 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 ENDOVQ8N8Q3 282 aaKnown RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 RBM15BQ8NDT2 890 aaKnown RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 MYEOVQ96EZ4 313 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 IFT43Q96FT9 208 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 FEM1CQ96JP0 617 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 ZNF512Q96ME7 567 aaPredicted RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 SEMA3CQ99985 751 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 DRC3Q9H069 523 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 HIPK3Q9H422 1215 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 XPR1Q9UBH6 696 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 RAP2CQ9Y3L5 183 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 DOCK4Q8N1I0 1966 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 MROH6A6NGR9 719 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 SBK3P0C264 359 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 ATXN1LP0C7T5 689 aaKnown RBP15.79■□□□□ 0.12
MKS1-204ENST00000537529 HLA-DPA1P20036 260 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 GRIA4P48058 902 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 LEPRP48357 1165 aaKnown RBP15.79■□□□□ 0.12
MKS1-204ENST00000537529 MXRA7P84157 204 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 ILF2Q12905 390 aaKnown RBP15.79■□□□□ 0.12
MKS1-204ENST00000537529 USP4Q13107 963 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 MSLNQ13421 630 aaPredicted RBP15.79■□□□□ 0.12
MKS1-204ENST00000537529 ZNF460Q14592 562 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 EPGNQ6UW88 154 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 LMNTD2Q8IXW0 634 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 OR13J1Q8NGT2 312 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 TTC8Q8TAM2 541 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 NXNL1Q96CM4 212 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 MAGEH1Q9H213 219 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 MRPL46Q9H2W6 279 aaKnown RBP15.79■□□□□ 0.12
MKS1-204ENST00000537529 MFSD1Q9H3U5 465 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 COG4Q9H9E3 785 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 PDFQ9HBH1 243 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 C15orf41Q9Y2V0 281 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 DNAH12Q6ZR08 3092 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 FGF1P05230 155 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 OR1D2P34982 312 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 PGGT1BP53609 377 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 IHHQ14623 411 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 FSCBQ5H9T9 825 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 HECTD3Q5T447 861 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 KLHDC10Q6PID8 442 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 CNSTQ6PJW8 725 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 CFAP61Q8NHU2 1237 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 PLD4Q96BZ4 506 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 GPR78Q96P69 363 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 OMDQ99983 421 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 MRPL57Q9BQC6 102 aaKnown RBP15.79■□□□□ 0.12
MKS1-204ENST00000537529 C1orf21Q9H246 121 aa15.79■□□□□ 0.12
MKS1-204ENST00000537529 GREB1Q4ZG55 1949 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 TTC24A2A3L6 582 aaPredicted RBP15.78■□□□□ 0.12
MKS1-204ENST00000537529 TARM1B6A8C7 271 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 ENTPD5O75356 428 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 EFEMP2O95967 443 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 RPL17P18621 184 aaKnown RBP15.78■□□□□ 0.12
MKS1-204ENST00000537529 SLC6A4P31645 630 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 RAP1GDS1P52306 607 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 CDH4P55283 916 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 CCL23P55773 120 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 PRAMEP78395 509 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 GNA12Q03113 381 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 PRKAA1Q13131 559 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 BTG3Q14201 252 aaPredicted RBP15.78■□□□□ 0.12
MKS1-204ENST00000537529 VWA5B1Q5TIE3 1220 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 KIAA1841Q6NSI8 718 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 CFAP52Q8N1V2 620 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 DCLRE1BQ9H816 532 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 NKX1-2Q9UD57 310 aaPredicted RBP15.78■□□□□ 0.12
MKS1-204ENST00000537529 AFF4Q9UHB7 1163 aaKnown RBP15.78■□□□□ 0.12
MKS1-204ENST00000537529 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
MKS1-204ENST00000537529 ZNF840PA6NDX5 716 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 DLX3O60479 287 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 EPOP01588 193 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 MPSTP25325 297 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 DLG1Q12959 904 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 SLC14A2Q15849 920 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 FAM83EQ2M2I3 478 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 ACCSLQ4AC99 568 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 RBM20Q5T481 1227 aaKnown RBP15.77■□□□□ 0.12
MKS1-204ENST00000537529 METTL21CQ5VZV1 264 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 ALG1LQ6GMV1 187 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 TMC7Q7Z402 723 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 CILP2Q8IUL8 1156 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 OR6P1Q8NGX9 317 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 SCG3Q8WXD2 468 aaKnown RBP15.77■□□□□ 0.12
MKS1-204ENST00000537529 TACO1Q9BSH4 297 aaKnown RBP15.77■□□□□ 0.12
MKS1-204ENST00000537529 PLA2G4CQ9UP65 541 aa15.77■□□□□ 0.12
MKS1-204ENST00000537529 TRIM17Q9Y577 477 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms