RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CCP110O43303 1012 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TM7SF2O76062 418 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 YBEYP58557 167 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RHOAP61586 193 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 GABREP78334 506 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CDKN3Q16667 212 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 DEFB133Q30KQ1 61 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LRRC73Q5JTD7 316 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 VPS36Q86VN1 386 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CXorf40AQ8TE69 158 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 C1QTNF7Q9BXJ2 289 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 MFHAS1Q9Y4C4 1052 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CREB3O43889 395 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 MMP20O60882 483 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ZNF143P52747 638 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 PCBP4P57723 403 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 YPEL5P62699 121 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TLE3Q04726 772 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 C1QBPQ07021 282 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 DNAJC24Q6P3W2 148 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 MON1BQ7L1V2 547 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SPACA3Q8IXA5 215 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ZNF248Q8NDW4 579 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 HMCESQ96FZ2 354 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LGMNQ99538 433 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 EPAS1Q99814 870 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CATSPERBQ9H7T0 1116 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 DKK3Q9UBP4 350 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 APOBEC3BQ9UH17 382 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LIMA1Q9UHB6 759 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 FZD10Q9ULW2 581 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ZNF462Q96JM2 2506 aa19.92■□□□□ 0.78
TNFRSF1B-204ENST00000536782 EME2A4GXA9 379 aaPredicted RBP19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LGALS16A8MUM7 142 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RASA4BC9J798 803 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TOR1BO14657 336 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RASA4O43374 803 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 DXOO77932 396 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TGM2P21980 687 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 IGFALSP35858 605 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LSSP48449 732 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 AIF1P55008 147 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 UBXN1Q04323 297 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SERINC3Q13530 473 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 NR0B2Q15466 257 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 PARP15Q460N3 678 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 PRRT3Q5FWE3 981 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 GUSBP11Q6P575 273 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RBM43Q6ZSC3 357 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 EFL1Q7Z2Z2 1120 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 PHACTR4Q8IZ21 702 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RBFAQ8N0V3 343 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 NETO2Q8NC67 525 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TPCN2Q8NHX9 752 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 GLMNQ92990 594 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TBATAQ96M53 351 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 MCEEQ96PE7 176 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 AGPAT1Q99943 283 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CPEB1Q9BZB8 566 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 KLC2Q9H0B6 622 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 POLR1BQ9H9Y6 1135 aa19.91■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TCRBV5S1A1TA0A578 114 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 WASH4PA8MWX3 477 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TK2O00142 265 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ATXN7O15265 892 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LZTS3O60299 673 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TIMP2P16035 220 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ITIH2P19823 946 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 XPAP23025 273 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RPIAP49247 311 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SUOXP51687 545 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ADKP55263 362 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RPL7AP62424 266 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ISXQ2M1V0 245 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 KLHL40Q2TBA0 621 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 FAXCQ5TGI0 409 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 GPR155Q7Z3F1 870 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 UMODL1-AS1Q8N2C9 162 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SLC39A7Q92504 469 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 HIC2Q96JB3 615 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 GBP4Q96PP9 640 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 NCAPGQ9BPX3 1015 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CNPY3Q9BT09 278 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 WRAP53Q9BUR4 548 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 BOCQ9BWV1 1114 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SLC13A1Q9BZW2 595 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TCEAL2Q9H3H9 227 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 MBNL1Q9NR56 388 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 COL6A6A6NMZ7 2263 aa19.9■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TEX51A0A1B0GUA7 166 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 FGF10O15520 208 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 GCATO75600 419 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 PRB1P04280 392 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ANXA6P08133 673 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 DESP17661 470 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 CDK11BP21127 795 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 EIF4A3P38919 411 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ERVPABLB-1P60509 514 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 MYL5Q02045 173 aa19.89■□□□□ 0.77
TNFRSF1B-204ENST00000536782 ELP6Q0PNE2 266 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms