RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 KCNK1O00180 336 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZNF189O75820 626 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CALB2P22676 271 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 GALNT2Q10471 571 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 AP1B1Q10567 949 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NAB1Q13506 487 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TAF11Q15544 211 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LRRC8BQ6P9F7 803 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MARK2Q7KZI7 788 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NPAS3Q8IXF0 933 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ACMSDQ8TDX5 336 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TFB1MQ8WVM0 346 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 HTR3CQ8WXA8 447 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 RSPRY1Q96DX4 576 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SPATA13Q96N96 652 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 BTBD10Q9BSF8 475 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SLC39A8Q9C0K1 460 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TMEM248Q9NWD8 314 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 PPARGC1AQ9UBK2 798 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SH3BP1Q9Y3L3 701 aa13.12□□□□□ -0.31
CDK5RAP3-202ENST00000536708 FGF19O95750 216 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LMNAP02545 664 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 RHOQP17081 205 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 IGFBP4P22692 258 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SERPINB6P35237 376 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 GARSP41250 739 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ABL2P42684 1182 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZNF135P52742 658 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 OCRLQ01968 901 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ARID3BQ8IVW6 561 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZSCAN18Q8TBC5 510 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 WFDC5Q8TCV5 224 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 E2F7Q96AV8 911 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LRRC3BQ96PB8 259 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ARL8BQ9NVJ2 186 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CLDND1Q9NY35 253 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 PLK2Q9NYY3 685 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MYLKQ15746 1914 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 UGT1A9O60656 530 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 OPHN1O60890 802 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SNNO75324 88 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 PAPLNO95428 1278 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NEFHP12036 1026 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CALRP27797 417 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SERPINB3P29508 390 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 HTR7P34969 479 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TEX44Q53QW1 395 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TRMT10BQ6PF06 316 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TPGS1Q6ZTW0 290 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MPP5Q8N3R9 675 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 FGF13Q92913 245 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 HMCESQ96FZ2 354 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MIPEPQ99797 713 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NAT9Q9BTE0 207 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MMADHCQ9H3L0 296 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 STOML2Q9UJZ1 356 aa13.11□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SDR42E2A6NKP2 422 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 RNF103O00237 685 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 BPGMP07738 259 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TPBGLP0DKB5 382 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MYL2P10916 166 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 GM2AP17900 193 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 DDX6P26196 483 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 OR1E1P30953 314 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ACVRL1P37023 503 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 VIPR2P41587 438 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NIPAL4Q0D2K0 466 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 BST1Q10588 318 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZBTB17Q13105 803 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 USP4Q13107 963 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ADAM15Q13444 863 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 PDK1Q15118 436 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZNF77Q15935 545 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 KYAT3Q6YP21 454 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TMEM184AQ6ZMB5 413 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ATPAF2Q8N5M1 289 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TEX9Q8N6V9 391 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 HDAC11Q96DB2 347 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CADM1Q9BY67 442 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LSM7Q9UK45 103 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 MAD1L1Q9Y6D9 718 aa13.1□□□□□ -0.31
CDK5RAP3-202ENST00000536708 COL6A3P12111 3177 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 A0A0D9SEW6 157 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 A6NHS1 94 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 GFRA2O00451 464 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZNF197O14709 1029 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 GSC2O15499 205 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms