RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 DAB2P98082 770 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 ZNF211Q13398 564 aaPredicted RBP12.63□□□□□ -0.39
PRKDC-207ENST00000536483 DPYSL2Q16555 572 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 CA9Q16790 459 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 SARM1Q6SZW1 724 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 KDM7AQ6ZMT4 941 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 ERN2Q76MJ5 926 aaKnown RBP12.63□□□□□ -0.39
PRKDC-207ENST00000536483 CACTIN-AS1Q8N1I8 211 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 DCBLD1Q8N8Z6 715 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 OR2AP1Q8NGE2 309 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 TEKT4Q8WW24 435 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 FGF11Q92914 225 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 ARRDC3Q96B67 414 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 PPP1R16AQ96I34 528 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 FCRL3Q96P31 734 aaPredicted RBP12.63□□□□□ -0.39
PRKDC-207ENST00000536483 THAP2Q9H0W7 228 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 FZD3Q9NPG1 666 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 KLHL11Q9NVR0 708 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 UCKL1Q9NWZ5 548 aa12.63□□□□□ -0.39
PRKDC-207ENST00000536483 HELZ2Q9BYK8 2649 aaKnown RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 RNF103O00237 685 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 KPNA3O00505 521 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 FFAR2O15552 330 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 CREB3O43889 395 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 LEFTY1O75610 366 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 POP4O95707 220 aaKnown RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 MT-CO3P00414 261 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 IL1R2P27930 398 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 CCNHP51946 323 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 TPI1P60174 286 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 SNRPD1P62314 119 aaKnown RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 E2F1Q01094 437 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 C19orf57Q0VDD7 668 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 DPYSQ14117 519 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 SLC18A3Q16572 532 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 ZNF284Q2VY69 593 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 MYLK3Q32MK0 819 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 RFX8Q6ZV50 586 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 LZTR1Q8N653 840 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 OR13H1Q8NG92 308 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 OR4C6Q8NH72 309 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 HCAR2Q8TDS4 363 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 RAB7BQ96AH8 199 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 HMCESQ96FZ2 354 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 KCTD15Q96SI1 283 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 CPEB1Q9BZB8 566 aaKnown RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 TNKS2Q9H2K2 1166 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 PDFQ9HBH1 243 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 HECAQ9UBI9 543 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 IP6K2Q9UHH9 426 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 LCMT1Q9UIC8 334 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 FCF1Q9Y324 198 aaKnown RBP12.62□□□□□ -0.39
PRKDC-207ENST00000536483 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 KALRNO60229 2985 aa12.62□□□□□ -0.39
PRKDC-207ENST00000536483 EEF2KO00418 725 aaKnown RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 ATXN7O15265 892 aaPredicted RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 PRAMEF11O60813 436 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 C1QL1O75973 258 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 GIMD1P0DJR0 217 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 MYF5P13349 255 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 ERCC2P18074 760 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 AKT2P31751 481 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 ACTN2P35609 894 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 CSNK1DP48730 415 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 CLDN2P57739 230 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 CCDC173Q0VFZ6 552 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 TBX2Q13207 712 aaPredicted RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 TBC1D25Q3MII6 688 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 TMEM259Q4ZIN3 620 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 CCDC122Q5T0U0 273 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 HORMAD1Q86X24 394 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 ARHGAP12Q8IWW6 846 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 ASB12Q8WXK4 309 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 CALN1Q9BXU9 219 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 DYRK4Q9NR20 520 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 GPATCH2LQ9NWQ4 482 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 CWC15Q9P013 229 aaKnown RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 RCOR3Q9P2K3 495 aaPredicted RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 UVRAGQ9P2Y5 699 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 MYO1AQ9UBC5 1043 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 DKK3Q9UBP4 350 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 PCSK1NQ9UHG2 260 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 ZFR2Q9UPR6 939 aaKnown RBP12.61□□□□□ -0.39
PRKDC-207ENST00000536483 FADS3Q9Y5Q0 445 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 ACTL7AQ9Y615 435 aa12.61□□□□□ -0.39
PRKDC-207ENST00000536483 TK2O00142 265 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 MYO1FO00160 1098 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 AREL1O15033 823 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 BUB1O43683 1085 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 PIAS2O75928 621 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 TMCC1O94876 653 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms