RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 TBC1D3HP0C7X1 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZNF806P0C7X5 589 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ITIH2P19823 946 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HSPA9P38646 679 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NR2C2P49116 596 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RAD51Q06609 339 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PRKD1Q15139 912 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MEI1Q5TIA1 1274 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3GQ6DHY5 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3CQ6IPX1 549 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FBXL19Q6PCT2 694 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TBC1D3Q8IZP1 549 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CNTD1Q8N815 330 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SNX19Q92543 992 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ECHDC3Q96DC8 303 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NUDCD1Q96RS6 583 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 IL12RB2Q99665 862 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CEP41Q9BYV8 373 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 OSBPL8Q9BZF1 889 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 KDM4CQ9H3R0 1056 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SUV39H2Q9H5I1 410 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NOD2Q9HC29 1040 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FSCN3Q9NQT6 498 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RBM22Q9NW64 420 aaKnown RBP eCLIP11.44□□□□□ -0.586e-10■■□□□ 12.5
TNFRSF1A-208ENST00000536194 DKK3Q9UBP4 350 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZFR2Q9UPR6 939 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FADS3Q9Y5Q0 445 aa11.44□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FRYLO94915 3013 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TCRBV7S2A1N4TA0A589 114 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 WNT9AO14904 365 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 AREL1O15033 823 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 APOC2P02655 101 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TIMP2P16035 220 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MAT2AP31153 395 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CCR5P51681 352 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 AP1S1P61966 158 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 IRX4P78413 519 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 IFI35P80217 286 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 DSC2Q02487 901 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NIPAL4Q0D2K0 466 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 AP1B1Q10567 949 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 GRM3Q14832 879 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PDK1Q15118 436 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NOMO1Q15155 1222 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CSRP2Q16527 193 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 WDR45BQ5MNZ6 344 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SYCP2LQ5T4T6 812 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SEL1L3Q68CR1 1132 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PRR23CQ6ZRP0 262 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZC3H18Q86VM9 953 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TRIM69Q86WT6 500 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RGL4Q8IZJ4 473 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZCCHC9Q8N567 271 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 UBL4BQ8N7F7 174 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ARRDC2Q8TBH0 407 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ACTL9Q8TC94 416 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 NSMCE1Q8WV22 266 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 P3H4Q92791 437 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZNF641Q96N77 438 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SEMA3CQ99985 751 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FAM118BQ9BPY3 351 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MIR1-1HGQ9H1L0 117 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 C10orf88Q9H8K7 445 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CAPN10Q9HC96 672 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PREBQ9HCU5 417 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SCUBE2Q9NQ36 999 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 VPS45Q9NRW7 570 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PYCARDQ9ULZ3 195 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ATP8A1Q9Y2Q0 1164 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FAM186AA6NE01 2351 aa11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZFHX2Q9C0A1 2572 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-208ENST00000536194 A0A1W2PPC4 97 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 USP27XA6NNY8 438 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 UPK3BL1B0FP48 263 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 UPK3BL2E5RIL1 263 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HTRA2O43464 458 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 AP1G1O43747 822 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 RNGTTO60942 597 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 JCHAINP01591 159 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PRKCGP05129 697 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MMP2P08253 660 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 PTPN3P26045 913 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 CD27P26842 260 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SERPINA4P29622 427 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 HOXD12P35452 270 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 MAPK8P45983 427 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 OTUD4Q01804 1114 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 BCL2L1Q07817 233 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 WASHC5Q12768 1159 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TRAF2Q12933 501 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 KLF1Q13351 362 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 FGL2Q14314 439 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 ZNF284Q2VY69 593 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TMEM259Q4ZIN3 620 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 TRIM61Q5EBN2 209 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 SLC23A3Q6PIS1 610 aa11.42□□□□□ -0.58
TNFRSF1A-208ENST00000536194 LAYNQ6UX15 382 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms