RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 PCDH8O95206 1070 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 TRIM16O95361 564 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 POP4O95707 220 aaKnown RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 UGT2B4P06133 528 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 TPM3P06753 285 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 TCF4P15884 667 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 IL1R2P27930 398 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 EPHA8P29322 1005 aaPredicted RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 HNRNPH3P31942 346 aaKnown RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 ABL2P42684 1182 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 GRK6P43250 576 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 ARRB1P49407 418 aaPredicted RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 NDST2P52849 883 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 RHOAP61586 193 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 OVGP1Q12889 678 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 DPYSQ14117 519 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 STAT4Q14765 748 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 MYLK3Q32MK0 819 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 PPP6R3Q5H9R7 873 aaPredicted RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 AFMIDQ63HM1 303 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 KIAA1161Q6NSJ0 714 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 RETREG3Q86VR2 466 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 SPATS2Q86XZ4 545 aaKnown RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 GATAD2AQ86YP4 633 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 RHBDD1Q8TEB9 315 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 SAP25Q8TEE9 199 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 ZCCHC14Q8WYQ9 949 aaKnown RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 KLK6Q92876 244 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 CELF6Q96J87 481 aaKnown RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 GDAP1L1Q96MZ0 367 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 MYOCQ99972 504 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 NUP85Q9BW27 656 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 SCNM1Q9BWG6 230 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 OSBPL1AQ9BXW6 950 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 ERVMER34-1Q9H9K5 563 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 FZD3Q9NPG1 666 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 TOR4AQ9NXH8 423 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 DONSONQ9NYP3 566 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 LHX3Q9UBR4 397 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 UBA2Q9UBT2 640 aaPredicted RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 ZFR2Q9UPR6 939 aaKnown RBP8.97□□□□□ -0.97
CHD4-204ENST00000535810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.97□□□□□ -0.978e-13■■■■■ 38.5
CHD4-204ENST00000535810 TRPM6Q9BX84 2022 aa8.97□□□□□ -0.97
CHD4-204ENST00000535810 NAV2Q8IVL1 2488 aa8.96□□□□□ -0.97
CHD4-204ENST00000535810 ARID1BQ8NFD5 2236 aaPredicted RBP8.96□□□□□ -0.97
CHD4-204ENST00000535810 IGSF10Q6WRI0 2623 aa8.96□□□□□ -0.97
CHD4-204ENST00000535810 J3KR12 359 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 YKT6O15498 198 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 DAPK3O43293 454 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 PRAMEF11O60813 436 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 DKK1O94907 266 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 IGSF6O95976 241 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 CYP1A2P05177 515 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ERCC2P18074 760 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 HNRNPA2B1P22626 353 aaKnown RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 HCAR3P49019 387 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 PAPOLAP51003 745 aaKnown RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 ZNF135P52742 658 aaPredicted RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 RPS21P63220 83 aaKnown RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 SLC25A11Q02978 314 aaKnown RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 FGL2Q14314 439 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 PIGHQ14442 188 aaPredicted RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 CYTH1Q15438 398 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 DPYSL2Q16555 572 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 SMTNL2Q2TAL5 461 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 INAVAQ3KP66 663 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 SOWAHCQ53LP3 525 aaPredicted RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 SPECC1LQ69YQ0 1117 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 TXNRD3NBQ6F5E7 133 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ALKBH5Q6P6C2 394 aaKnown RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 GDPD4Q6W3E5 623 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 GCNT7Q6ZNI0 430 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 RAB44Q7Z6P3 723 aaPredicted RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 SLCO6A1Q86UG4 719 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ARHGAP12Q8IWW6 846 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 CHCHD4Q8N4Q1 142 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 NIPA2Q8N8Q9 360 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 PNPLA1Q8N8W4 532 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 RNF214Q8ND24 703 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ADAMTS14Q8WXS8 1223 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 RAB7BQ96AH8 199 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ARHGEF26Q96DR7 871 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 BTBD6Q96KE9 485 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 EXOC2Q96KP1 924 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 KLHL32Q96NJ5 620 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 DNAJC7Q99615 494 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 CDC6Q99741 560 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 NCAPGQ9BPX3 1015 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 SLC39A8Q9C0K1 460 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 RBSNQ9H1K0 784 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.96□□□□□ -0.98
CHD4-204ENST00000535810 CWC15Q9P013 229 aaKnown RBP8.96□□□□□ -0.98
CHD4-204ENST00000535810 GGT7Q9UJ14 662 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ANAPC7Q9UJX3 599 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 KLK13Q9UKR3 277 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ITM2BQ9Y287 266 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 MFHAS1Q9Y4C4 1052 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 NEUROG3Q9Y4Z2 214 aa8.96□□□□□ -0.98
CHD4-204ENST00000535810 ARHGAP42A6NI28 874 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms