RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 NAP1L5Q96NT1 182 aaPredicted RBP10.96□□□□□ -0.65
CCDC60-202ENST00000535685 C1QTNF2Q9BXJ5 285 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 SLC17A9Q9BYT1 436 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 CPEB1Q9BZB8 566 aaKnown RBP10.96□□□□□ -0.65
CCDC60-202ENST00000535685 HAUS4Q9H6D7 363 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 LRRC19Q9H756 370 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 ACTL7AQ9Y615 435 aa10.96□□□□□ -0.65
CCDC60-202ENST00000535685 A0A1W2PQJ5 194 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 C16orf96A6NNT2 1141 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 RASA4BC9J798 803 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 DDX3XO00571 662 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 SLC31A1O15431 190 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 RASA4O43374 803 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 TMCC1O94876 653 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 PCDH8O95206 1070 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 FTLP02792 175 aaPredicted RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 THEGLP0DJG4 465 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 MYBL1P10243 752 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 PBX1P40424 430 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 HCAR3P49019 387 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 DNA2P51530 1060 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 IL9RQ01113 521 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 RAD51Q06609 339 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 BNIP3Q12983 259 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 FGL2Q14314 439 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 GRM3Q14832 879 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ACAP1Q15027 740 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ERMARDQ5T6L9 678 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 E4F1Q66K89 784 aaPredicted RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 KYAT3Q6YP21 454 aaKnown RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 GCNT7Q6ZNI0 430 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 PROSER1Q86XN7 944 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ARFGAP1Q8N6T3 406 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ZCCHC14Q8WYQ9 949 aaKnown RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 IQCDQ96DY2 449 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 TRIM11Q96F44 468 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 CNDP2Q96KP4 475 aaKnown RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 BMFQ96LC9 184 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 GDAP1L1Q96MZ0 367 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 KLF6Q99612 283 aaPredicted RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 TM6SF2Q9BZW4 377 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ISCUQ9H1K1 167 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ZDHHC6Q9H6R6 413 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 GPSM3Q9Y4H4 160 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 BZW2Q9Y6E2 419 aaKnown RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ARHGEF17Q96PE2 2063 aaPredicted RBP10.95□□□□□ -0.66
CCDC60-202ENST00000535685 SHROOM3Q8TF72 1996 aa10.95□□□□□ -0.66
CCDC60-202ENST00000535685 ADAMTS20P59510 1910 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 PTPRQQ9UMZ3 2332 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 SRRM3A6NNA2 597 aaPredicted RBP10.94□□□□□ -0.66
CCDC60-202ENST00000535685 A6NNZ2 444 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 TOR1BO14657 336 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 SPINT1O43278 529 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 BUB1O43683 1085 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 CREB3O43889 395 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 PRAMEF11O60813 436 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 RFPL3O75679 317 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 RNF8O76064 485 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 IGSF6O95976 241 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 PRLRP16471 622 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 ACP1P24666 158 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 PSMA2P25787 234 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 PCK1P35558 622 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 CSNK1DP48730 415 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 ACADVLP49748 655 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 TPI1P60174 286 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 KLHL30Q0D2K2 578 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 ZNF211Q13398 564 aaPredicted RBP10.94□□□□□ -0.66
CCDC60-202ENST00000535685 AFMIDQ63HM1 303 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 SEL1L3Q68CR1 1132 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 CYP4V2Q6ZWL3 525 aaPredicted RBP10.94□□□□□ -0.66
CCDC60-202ENST00000535685 EID2Q8N6I1 236 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 OR13H1Q8NG92 308 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 RFFLQ8WZ73 363 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 HMCESQ96FZ2 354 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 KLC2Q9H0B6 622 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 PDFQ9HBH1 243 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 MRPL47Q9HD33 250 aaKnown RBP10.94□□□□□ -0.66
CCDC60-202ENST00000535685 AP4E1Q9UPM8 1137 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 CA5BQ9Y2D0 317 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 SCINQ9Y6U3 715 aa10.94□□□□□ -0.66
CCDC60-202ENST00000535685 UNC13CQ8NB66 2214 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 SPTY2D1-AS1A0A0U1RR47 76 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 TSPAN11A1L157 253 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 ARHGAP42A6NI28 874 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 TAF4O00268 1085 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 KRIT1O00522 736 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 PIAS2O75928 621 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 PAK4O96013 591 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-202ENST00000535685 SERPINC1P01008 464 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 UGT2B4P06133 528 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 CKMT2P17540 419 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 DGKAP23743 735 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 RABIFP47224 123 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 SGCGQ13326 291 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 CYTH1Q15438 398 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 GDPD4Q6W3E5 623 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 Q6ZSR6 202 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 SLC22A18ASQ8N1D0 253 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms