RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 H1FNTQ75WM6 255 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-205ENST00000535375 CCDC105Q8IYK2 499 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 CLEC18CQ8NCF0 446 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 TNIP2Q8NFZ5 429 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 LMO3Q8TAP4 145 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 TRIB2Q92519 343 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 EYA3Q99504 573 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 CLSTN3Q9BQT9 956 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 CLK4Q9HAZ1 481 aaKnown RBP5.3□□□□□ -1.56
PRKDC-205ENST00000535375 OCIAD1Q9NX40 245 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 CNOT7Q9UIV1 285 aaKnown RBP5.3□□□□□ -1.56
PRKDC-205ENST00000535375 SLC45A1Q9Y2W3 748 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 BTBD18B2RXH4 712 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 VNN2O95498 520 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 PTPN2P17706 415 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 PDLIM4P50479 330 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 GAS1P54826 345 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 BIRC3Q13489 604 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 ZRSR2Q15696 482 aaKnown RBP5.29□□□□□ -1.56
PRKDC-205ENST00000535375 BBS12Q6ZW61 710 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 RBM23Q86U06 439 aaKnown RBP5.29□□□□□ -1.56
PRKDC-205ENST00000535375 TBC1D26Q86UD7 250 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 RUFY2Q8WXA3 655 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 GCC1Q96CN9 775 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 ZC3HAV1LQ96H79 300 aaKnown RBP5.29□□□□□ -1.56
PRKDC-205ENST00000535375 FIZ1Q96SL8 496 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 MMTAG2Q9BU76 263 aaKnown RBP5.29□□□□□ -1.56
PRKDC-205ENST00000535375 OR6C3Q9NZP0 311 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 PEMTQ9UBM1 199 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 NDRG3Q9UGV2 375 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 DGKBQ9Y6T7 804 aa5.29□□□□□ -1.56
PRKDC-205ENST00000535375 ADGRF5Q8IZF2 1346 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 DYTNA2CJ06 578 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 PABPN1LA6NDY0 278 aaKnown RBP5.28□□□□□ -1.56
PRKDC-205ENST00000535375 ZBTB11O95625 1053 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-205ENST00000535375 CH25HO95992 272 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 ZNF12P17014 697 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 CHRNDQ07001 517 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.28□□□□□ -1.56
PRKDC-205ENST00000535375 KIF5AQ12840 1032 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 ITGADQ13349 1161 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 C17orf99Q6UX52 265 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 LRRC8DQ7L1W4 858 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 ZNF354CQ86Y25 554 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 SFTPA2Q8IWL1 248 aa5.28□□□□□ -1.56
PRKDC-205ENST00000535375 LSM14AQ8ND56 463 aaKnown RBP5.28□□□□□ -1.56
PRKDC-205ENST00000535375 IGLV5-52A0A0A0MRZ9 124 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 GOLGA6L10A0A0M3HER8 536 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 TIMM23O14925 209 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 RGS11O94810 467 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 IFIT1P09914 478 aaKnown RBP5.27□□□□□ -1.57
PRKDC-205ENST00000535375 PSMC2P35998 433 aaKnown RBP5.27□□□□□ -1.57
PRKDC-205ENST00000535375 TUBA1BP68363 451 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 RPL36AP83881 106 aaKnown RBP5.27□□□□□ -1.57
PRKDC-205ENST00000535375 TRAF3Q13114 568 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 VEPH1Q14D04 833 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 KIF19Q2TAC6 998 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 RETSATQ6NUM9 610 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 SPSB3Q6PJ21 355 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 SLC22A25Q6T423 547 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 PRSS57Q6UWY2 283 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 FAM160B2Q86V87 743 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 LRRTM4Q86VH4 590 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 GJC3Q8NFK1 279 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 EVPLQ92817 2033 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 MTBPQ96DY7 904 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 LMLNQ96KR4 655 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 LRFN5Q96NI6 719 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 DUX5Q96PT3 197 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 CYSLTR2Q9NS75 346 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 ZNF112Q9UJU3 913 aa5.27□□□□□ -1.57
PRKDC-205ENST00000535375 PLSCR5A0PG75 271 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 DAOP14920 347 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 SRD5A1P18405 259 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 FMO4P31512 558 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 RYKP34925 604 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 COMPP49747 757 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-205ENST00000535375 NR1H2P55055 460 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 CDH15P55291 814 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 TDGQ13569 410 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 SHFQ7M4L6 423 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 C16orf82Q7Z2V1 217 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 ARMC9Q7Z3E5 817 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 TADA2BQ86TJ2 420 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 GPAT4Q86UL3 456 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 CPOQ8IVL8 374 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 KIAA2013Q8IYS2 634 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 AADATQ8N5Z0 425 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 RBMXL3Q8N7X1 1067 aaKnown RBP5.26□□□□□ -1.57
PRKDC-205ENST00000535375 HERVK_113Q902F9 699 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 UBXN10Q96LJ8 280 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 PHF7Q9BWX1 381 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-205ENST00000535375 HSF4Q9ULV5 492 aa5.26□□□□□ -1.57
PRKDC-205ENST00000535375 A0A0U1RQJ8 604 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 TEX22C9J3V5 150 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 KLRF2D3W0D1 207 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 POU1F1P28069 291 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 BNC1Q01954 994 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 DDR1Q08345 913 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 DHX8Q14562 1220 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms