RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PTPN1P18031 435 aaKnown RBP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 ADSLP30566 484 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 SOX11P35716 441 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 MLLT3P42568 568 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 E2F2Q14209 437 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 FLOT2Q14254 428 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 FAM26DQ5JW98 314 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 NEK5Q6P3R8 708 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 ELMOD2Q8IZ81 293 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 ACTRT2Q8TDY3 377 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 FAR2Q96K12 515 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 DEFB118Q96PH6 123 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 CCDC177Q9NQR7 707 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 EPS15L1Q9UBC2 864 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 NUDT5Q9UKK9 219 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 LAMA1P25391 3075 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 MICAL3Q7RTP6 2002 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 SYNJ2BP-COX16A0A087WUM0 186 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 ASNA1O43681 348 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 ENDOD1O94919 500 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 BDNFP23560 247 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 RPL10P27635 214 aaKnown RBP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 RAD23AP54725 363 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 PKNOX1P55347 436 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 LIN9Q5TKA1 542 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 SETD3Q86TU7 594 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-216ENST00000534765 SPNS2Q8IVW8 549 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 MYO1HQ8N1T3 1032 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 PLD5Q8N7P1 536 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 EXD1Q8NHP7 514 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 PCDH19Q8TAB3 1148 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 CYGBQ8WWM9 190 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 NACC2Q96BF6 587 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 SPC25Q9HBM1 224 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 OSER1Q9NX31 292 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 COX16Q9P0S2 106 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 CDC14AQ9UNH5 594 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 SHROOM3Q8TF72 1996 aa9.14□□□□□ -0.95
SF3B2-216ENST00000534765 TMEM114B3SHH9 223 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 F5H423 210 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 COPEO14579 308 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ICMTO60725 284 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 PTGS2P35354 604 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF143P52747 638 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 COPAP53621 1224 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 CCL23P55773 120 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 PTK7Q13308 1070 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 OLIG2Q13516 323 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ARHGAP17Q68EM7 881 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 UGT2A3Q6UWM9 527 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 GATAD2AQ86YP4 633 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 PARP8Q8N3A8 854 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 DBF4BQ8NFT6 615 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ART4Q93070 314 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 C12orf43Q96C57 262 aaKnown RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF419Q96HQ0 510 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 C17orf80Q9BSJ5 609 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 SNRNP25Q9BV90 132 aaKnown RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 RSAD1Q9HA92 442 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 MRPL47Q9HD33 250 aaKnown RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 APOBEC2Q9Y235 224 aaKnown RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 DOCK6Q96HP0 2047 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 NYNRINQ9P2P1 1898 aaKnown RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 KRBA1A5PL33 1030 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 DCAF8L1A6NGE4 600 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 B3GAT3O94766 335 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 CD4P01730 458 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 IFI30P13284 250 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 WARSP23381 471 aaKnown RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 MAN1A1P33908 653 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 SLC1A1P43005 524 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 SLC6A3Q01959 620 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 CHI3L2Q15782 390 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 NIPAL1Q6NVV3 410 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ELMSAN1Q6PJG2 1045 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 NT5DC4Q86YG4 428 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 TTC30BQ8N4P2 665 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ANKRD52Q8NB46 1076 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 CMASQ8NFW8 434 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ACTL9Q8TC94 416 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF512Q96ME7 567 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 NEURL2Q9BR09 285 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 MECRQ9BV79 373 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-216ENST00000534765 PIGVQ9NUD9 493 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 MYRFQ9Y2G1 1151 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 CST8O60676 142 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 USP17L7P0C7H9 530 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 GPS1Q13098 491 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.13□□□□□ -0.955e-9■■■□□ 15.5
SF3B2-216ENST00000534765 BNIPLQ7Z465 357 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 TRABD2AQ86V40 505 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 GRAMD2AQ8IUY3 354 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 TTC39CQ8N584 583 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 EDEM1Q92611 657 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 DEPDC7Q96QD5 511 aa9.13□□□□□ -0.95
SF3B2-216ENST00000534765 VN1R3Q9BXE9 311 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms