RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 C16orf96A6NNT2 1141 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 METTL12A8MUP2 240 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 MIF4GDA9UHW6 222 aaKnown RBP14.17□□□□□ -0.14
VPS11-205ENST00000534551 C10orf142B7Z368 130 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 WNT9AO14904 365 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 PPP1R12AO14974 1030 aaPredicted RBP14.17□□□□□ -0.14
VPS11-205ENST00000534551 MATN3O15232 486 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 JCHAINP01591 159 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 CCNB1P14635 433 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 PRLRP16471 622 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 CCNCP24863 283 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 PTPN7P35236 360 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 OTUD4Q01804 1114 aaKnown RBP14.17□□□□□ -0.14
VPS11-205ENST00000534551 ITKQ08881 620 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 NIPAL4Q0D2K0 466 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 PDK1Q15118 436 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 NOMO1Q15155 1222 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 PTPRRQ15256 657 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 MEI1Q5TIA1 1274 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 KDM7AQ6ZMT4 941 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 C17orf53Q8N3J3 647 aaPredicted RBP14.17□□□□□ -0.14
VPS11-205ENST00000534551 CNTD1Q8N815 330 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 OR2T34Q8NGX1 318 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 ACTL9Q8TC94 416 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 NSMCE1Q8WV22 266 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 P3H4Q92791 437 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 SLC6A18Q96N87 628 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 QKIQ96PU8 341 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS11-205ENST00000534551 SMIM14Q96QK8 99 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 NUDCD1Q96RS6 583 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 SEMA3CQ99985 751 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 OSBPL1AQ9BXW6 950 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 HDAC8Q9BY41 377 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 FZD3Q9NPG1 666 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 RBM22Q9NW64 420 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS11-205ENST00000534551 ZFR2Q9UPR6 939 aaKnown RBP14.17□□□□□ -0.14
VPS11-205ENST00000534551 CA5BQ9Y2D0 317 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 R3HDM2Q9Y2K5 976 aaKnown RBP14.17□□□□□ -0.14
VPS11-205ENST00000534551 PCDHGC4Q9Y5F7 938 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 FADS3Q9Y5Q0 445 aa14.17□□□□□ -0.14
VPS11-205ENST00000534551 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.17□□□□□ -0.14
VPS11-205ENST00000534551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3DA0A087WVF3 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3IA0A087WXS9 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3EA0A087X179 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3KA0A087X1G2 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 A0A1W2PQU0 124 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TSPAN11A1L157 253 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3FA6NER0 549 aaPredicted RBP14.16□□□□□ -0.14
VPS11-205ENST00000534551 LRRC72A6NJI9 287 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3LB9A6J9 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 APOC4-APOC2K7ER74 178 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 ENC1O14682 589 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 SLC7A4O43246 635 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 RNGTTO60942 597 aaKnown RBP14.16□□□□□ -0.14
VPS11-205ENST00000534551 APOC2P02655 101 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3HP0C7X1 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TIMP2P16035 220 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 COPS2P61201 443 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 AP1S1P61966 158 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 IFI35P80217 286 aaPredicted RBP14.16□□□□□ -0.14
VPS11-205ENST00000534551 HNRNPDQ14103 355 aaKnown RBP14.16□□□□□ -0.14
VPS11-205ENST00000534551 PLA2G2CQ5R387 149 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 CCDC181Q5TID7 509 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3GQ6DHY5 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3CQ6IPX1 549 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 FBXL19Q6PCT2 694 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 ADAT2Q7Z6V5 191 aaKnown RBP14.16□□□□□ -0.14
VPS11-205ENST00000534551 KIAA2013Q8IYS2 634 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TBC1D3Q8IZP1 549 aaPredicted RBP14.16□□□□□ -0.14
VPS11-205ENST00000534551 CADM4Q8NFZ8 388 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 LOXL4Q96JB6 756 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 AGAP3Q96P47 875 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 IL12RB2Q99665 862 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 TLR10Q9BXR5 811 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 CPEB1Q9BZB8 566 aaKnown RBP14.16□□□□□ -0.14
VPS11-205ENST00000534551 BRD8Q9H0E9 1235 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 SUV39H2Q9H5I1 410 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 ATP13A3Q9H7F0 1226 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 SEMA4GQ9NTN9 838 aa14.16□□□□□ -0.14
VPS11-205ENST00000534551 A0A0U1RQS6 177 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 UPK3BL1B0FP48 263 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 UPK3BL2E5RIL1 263 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 TRAFD1O14545 582 aaPredicted RBP14.15□□□□□ -0.14
VPS11-205ENST00000534551 PCDH8O95206 1070 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 CFIP05156 583 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 MMP2P08253 660 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 PTPN3P26045 913 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 SERPINA4P29622 427 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 CXCR5P32302 372 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 HSPA9P38646 679 aaKnown RBP14.15□□□□□ -0.14
VPS11-205ENST00000534551 CSNK1DP48730 415 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 RENBPP51606 427 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 RAD51Q06609 339 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 WASHC5Q12768 1159 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 KLF1Q13351 362 aaPredicted RBP14.15□□□□□ -0.14
VPS11-205ENST00000534551 FGL2Q14314 439 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 RPS6KA1Q15418 735 aa14.15□□□□□ -0.14
VPS11-205ENST00000534551 KCTD19Q17RG1 926 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms