RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NRSN2Q9GZP1 204 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 LRRC19Q9H756 370 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 AIPL1Q9NZN9 384 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 UBA2Q9UBT2 640 aaPredicted RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 KLF15Q9UIH9 416 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 AP4E1Q9UPM8 1137 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 WDFY3Q8IZQ1 3526 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 PKD1L2Q7Z442 2459 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 DMXL2Q8TDJ6 3036 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 A0A1W2PQC6 194 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 EIF3CLB5ME19 914 aaKnown RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 H3BM21 787 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 MT-CO3P00414 261 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 JUNDP17535 347 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 XPAP23025 273 aaPredicted RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 PRKCIP41743 596 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 DUSP3P51452 185 aaPredicted RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 THOP1P52888 689 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 KLHL30Q0D2K2 578 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 PTK2BQ14289 1009 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 GRM3Q14832 879 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 RTP5Q14D33 572 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 UGP2Q16851 508 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 CAVIN1Q6NZI2 390 aaKnown RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 VPS36Q86VN1 386 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 DCBLD1Q8N8Z6 715 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 FAM181AQ8N9Y4 354 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 ZNF548Q8NEK5 533 aaPredicted RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 HCAR2Q8TDS4 363 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 DCBLD2Q96PD2 775 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 EIF3CQ99613 913 aaKnown RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 NCAPGQ9BPX3 1015 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 WRAP53Q9BUR4 548 aaKnown RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 SLC39A8Q9C0K1 460 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 ABCG4Q9H172 646 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 SUV39H2Q9H5I1 410 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 SCUBE2Q9NQ36 999 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 MBNL1Q9NR56 388 aaKnown RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 LHX3Q9UBR4 397 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 CNOT8Q9UFF9 292 aaKnown RBP9.01□□□□□ -0.97
COPB1-211ENST00000534234 CSNK1G3Q9Y6M4 447 aa9.01□□□□□ -0.97
COPB1-211ENST00000534234 A0A087WV48 116 aa9□□□□□ -0.97
COPB1-211ENST00000534234 A0A1B0GTH6 734 aa9□□□□□ -0.97
COPB1-211ENST00000534234 ARHGAP42A6NI28 874 aa9□□□□□ -0.97
COPB1-211ENST00000534234 DDX3XO00571 662 aaKnown RBP eCLIP9□□□□□ -0.975e-24■■■■□ 22.8
COPB1-211ENST00000534234 AQP9O43315 295 aa9□□□□□ -0.97
COPB1-211ENST00000534234 PRPSAP2O60256 369 aa9□□□□□ -0.97
COPB1-211ENST00000534234 OPA1O60313 960 aa9□□□□□ -0.97
COPB1-211ENST00000534234 BUB1BO60566 1050 aaPredicted RBP9□□□□□ -0.97
COPB1-211ENST00000534234 PRAMEF11O60813 436 aa9□□□□□ -0.97
COPB1-211ENST00000534234 PALMO75781 387 aa9□□□□□ -0.97
COPB1-211ENST00000534234 PIGNO95427 931 aa9□□□□□ -0.97
COPB1-211ENST00000534234 SERPINC1P01008 464 aa9□□□□□ -0.97
COPB1-211ENST00000534234 SKILP12757 684 aa9□□□□□ -0.97
COPB1-211ENST00000534234 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
COPB1-211ENST00000534234 ERCC2P18074 760 aa9□□□□□ -0.97
COPB1-211ENST00000534234 MIPP30301 263 aa9□□□□□ -0.97
COPB1-211ENST00000534234 EIF4A3P38919 411 aaKnown RBP9□□□□□ -0.97
COPB1-211ENST00000534234 PAPOLAP51003 745 aaKnown RBP9□□□□□ -0.97
COPB1-211ENST00000534234 SUOXP51687 545 aa9□□□□□ -0.97
COPB1-211ENST00000534234 YPEL5P62699 121 aa9□□□□□ -0.97
COPB1-211ENST00000534234 ELP6Q0PNE2 266 aa9□□□□□ -0.97
COPB1-211ENST00000534234 EIF2B5Q13144 721 aaKnown RBP9□□□□□ -0.97
COPB1-211ENST00000534234 NR1I3Q14994 352 aa9□□□□□ -0.97
COPB1-211ENST00000534234 TMEM52BQ4KMG9 183 aa9□□□□□ -0.97
COPB1-211ENST00000534234 PPP6R3Q5H9R7 873 aaPredicted RBP9□□□□□ -0.97
COPB1-211ENST00000534234 E4F1Q66K89 784 aaPredicted RBP9□□□□□ -0.97
COPB1-211ENST00000534234 ZCCHC8Q6NZY4 707 aaKnown RBP9□□□□□ -0.97
COPB1-211ENST00000534234 RFX8Q6ZV50 586 aa9□□□□□ -0.97
COPB1-211ENST00000534234 PDZD3Q86UT5 571 aa9□□□□□ -0.97
COPB1-211ENST00000534234 CAMK1DQ8IU85 385 aa9□□□□□ -0.97
COPB1-211ENST00000534234 LMX1AQ8TE12 382 aa9□□□□□ -0.97
COPB1-211ENST00000534234 FNIP1Q8TF40 1166 aa9□□□□□ -0.97
COPB1-211ENST00000534234 BTN2A2Q8WVV5 523 aa9□□□□□ -0.97
COPB1-211ENST00000534234 ZNF641Q96N77 438 aaPredicted RBP9□□□□□ -0.97
COPB1-211ENST00000534234 PEBP4Q96S96 227 aa9□□□□□ -0.97
COPB1-211ENST00000534234 IL12RB2Q99665 862 aa9□□□□□ -0.97
COPB1-211ENST00000534234 SNRNP25Q9BV90 132 aaKnown RBP9□□□□□ -0.97
COPB1-211ENST00000534234 C1QTNF7Q9BXJ2 289 aa9□□□□□ -0.97
COPB1-211ENST00000534234 EDEM3Q9BZQ6 932 aa9□□□□□ -0.97
COPB1-211ENST00000534234 TRIM7Q9C029 511 aa9□□□□□ -0.97
COPB1-211ENST00000534234 PDFQ9HBH1 243 aa9□□□□□ -0.97
COPB1-211ENST00000534234 USP29Q9HBJ7 922 aa9□□□□□ -0.97
COPB1-211ENST00000534234 EVA1BQ9NVM1 165 aa9□□□□□ -0.97
COPB1-211ENST00000534234 MYO1AQ9UBC5 1043 aa9□□□□□ -0.97
COPB1-211ENST00000534234 SPASTQ9UBP0 616 aa9□□□□□ -0.97
COPB1-211ENST00000534234 FREM2Q5SZK8 3169 aa9□□□□□ -0.97
COPB1-211ENST00000534234 TMEM131Q92545 1883 aa9□□□□□ -0.97
COPB1-211ENST00000534234 COL5A1P20908 1838 aaPredicted RBP9□□□□□ -0.97
COPB1-211ENST00000534234 LY6G6EA0A0G2JKS1 128 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 CPED1A4D0V7 1026 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 DFFAO00273 331 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
COPB1-211ENST00000534234 GP1BAP07359 652 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 IGFALSP35858 605 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 CSNK1DP48730 415 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 HCAR3P49019 387 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 C1orf61Q13536 156 aa8.99□□□□□ -0.97
COPB1-211ENST00000534234 LRRC14Q15048 493 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms