RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	TMC8	Q8IU68	726 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	MIGA1	Q8NAN2	632 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	RFWD2	Q8NHY2	731 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	OIT3	Q8WWZ8	545 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	ST8SIA4	Q92187	359 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	RNF125	Q96EQ8	232 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	URB1-AS1	Q96HZ7	61 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	APOPT1	Q96IL0	206 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	YME1L1	Q96TA2	773 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	GLIS2	Q9BZE0	524 aa	Predicted RBP	3.59	□□□□□ -1.83
RDX-215	ENST00000533961	TM6SF1	Q9BZW5	370 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	NPFFR1	Q9GZQ6	430 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	PAIP1	Q9H074	479 aa	Known RBP	3.59	□□□□□ -1.83
RDX-215	ENST00000533961	ATP8A2	Q9NTI2	1148 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	FBXO40	Q9UH90	709 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	ADGRF5	Q8IZF2	1346 aa		3.59	□□□□□ -1.83
RDX-215	ENST00000533961	FAM157A	C9JC47	383 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	HOXC11	O43248	304 aa	Predicted RBP	3.58	□□□□□ -1.84
RDX-215	ENST00000533961	LDB2	O43679	373 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	SERPINC1	P01008	464 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	TNNT1	P13805	278 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	ENO3	P13929	434 aa	Predicted RBP	3.58	□□□□□ -1.84
RDX-215	ENST00000533961	CHRNB2	P17787	502 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	AVPR1A	P37288	418 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	CXCR3	P49682	368 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	CLCNKB	P51801	687 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	GAS1	P54826	345 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	CDH15	P55291	814 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	SEC61A1	P61619	476 aa	Known RBP	3.58	□□□□□ -1.84
RDX-215	ENST00000533961	RPP30	P78346	268 aa	Known RBP	3.58	□□□□□ -1.84
RDX-215	ENST00000533961	EFNB1	P98172	346 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	POU3F1	Q03052	451 aa	Predicted RBP	3.58	□□□□□ -1.84
RDX-215	ENST00000533961	ZNF284	Q2VY69	593 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	SLC9B1	Q4ZJI4	515 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	FSCB	Q5H9T9	825 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	NADSYN1	Q6IA69	706 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	MMS22L	Q6ZRQ5	1243 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	GPAT4	Q86UL3	456 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	CADM3	Q8N126	398 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	PRR26	Q8N8Z3	221 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	NEXN-AS1	Q8NBZ9	246 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	OR4N2	Q8NGD1	307 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	INTS2	Q9H0H0	1204 aa	Known RBP	3.58	□□□□□ -1.84
RDX-215	ENST00000533961	CDT1	Q9H211	546 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	KLHL31	Q9H511	634 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	HSPB7	Q9UBY9	170 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	NAALADL1	Q9UQQ1	740 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	CNPY2	Q9Y2B0	182 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	MST1R	Q04912	1400 aa		3.58	□□□□□ -1.84
RDX-215	ENST00000533961	ASAP2	O43150	1006 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	RGS14	O43566	566 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	SEC31A	O94979	1220 aa	Known RBP	3.57	□□□□□ -1.84
RDX-215	ENST00000533961	TBX18	O95935	607 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	LCAT	P04180	440 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	PRSS2	P07478	247 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	GNLY	P22749	145 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	ITGB8	P26012	769 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	PIGA	P37287	484 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
RDX-215	ENST00000533961	EFR3A	Q14156	821 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	GPR68	Q15743	365 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	ALF	Q53S48	1182 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	TDRD12	Q587J7	1177 aa	Known RBP	3.57	□□□□□ -1.84
RDX-215	ENST00000533961	EFHC1	Q5JVL4	640 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	NEK10	Q6ZWH5	1172 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	SERPINA11	Q86U17	422 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	DHX40	Q8IX18	779 aa	Known RBP	3.57	□□□□□ -1.84
RDX-215	ENST00000533961	CPXM2	Q8N436	756 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	TCP11L2	Q8N4U5	519 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	FAM216A	Q8WUB2	273 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	SLC35F5	Q8WV83	523 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	NUDCD2	Q8WVJ2	157 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	KLHL15	Q96M94	604 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	TEFM	Q96QE5	360 aa	Known RBP	3.57	□□□□□ -1.84
RDX-215	ENST00000533961	CD180	Q99467	661 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	MVB12B	Q9H7P6	319 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	UBN1	Q9NPG3	1134 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	GRHL1	Q9NZI5	618 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	IL1RAPL1	Q9NZN1	696 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	PDP2	Q9P2J9	529 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	CNOT7	Q9UIV1	285 aa	Known RBP	3.57	□□□□□ -1.84
RDX-215	ENST00000533961	SRPRB	Q9Y5M8	271 aa	Known RBP	3.57	□□□□□ -1.84
RDX-215	ENST00000533961	PTGDR2	Q9Y5Y4	395 aa		3.57	□□□□□ -1.84
RDX-215	ENST00000533961	TEX13C	A0A0J9YWL9	993 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	CBY3	A6NI87	242 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	HSPB2	A8KAH6	182 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	INAFM1	C9JVW0	142 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961		J3KR12	359 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	LIAS	O43766	372 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	TSPAN3	O60637	253 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	SOX30	O94993	753 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	CD4	P01730	458 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	GALT	P07902	379 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	CHRM4	P08173	479 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	IFIT1	P09914	478 aa	Known RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	CTPS1	P17812	591 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	TNFAIP3	P21580	790 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	RGS2	P41220	211 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	ART1	P52961	327 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	CDH12	P55289	794 aa		3.56	□□□□□ -1.84

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