RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CDK9P50750 372 aaKnown RBP16.78■□□□□ 0.28
CTSB-228ENST00000533455 TAS2R39P59534 338 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 TUBA4AP68366 448 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 TMEM62Q0P6H9 643 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 CTBP1Q13363 440 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 FASTKQ14296 549 aaKnown RBP16.78■□□□□ 0.28
CTSB-228ENST00000533455 MYBPC3Q14896 1274 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 NRF1Q16656 503 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 FAM45BPQ6NSW5 357 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 C2CD4AQ8NCU7 369 aaPredicted RBP16.78■□□□□ 0.28
CTSB-228ENST00000533455 PPHLN1Q8NEY8 458 aaKnown RBP16.78■□□□□ 0.28
CTSB-228ENST00000533455 FAM45AQ8TCE6 357 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 HEXDCQ8WVB3 486 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 FCRL5Q96RD9 977 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 CCT7Q99832 543 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 OMDQ99983 421 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 MED10Q9BTT4 135 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 COLEC11Q9BWP8 271 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 KATNBL1Q9H079 304 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 PCDHAC1Q9H158 963 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 PNPLA3Q9NST1 481 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 DDIT4Q9NX09 232 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 GINS2Q9Y248 185 aa16.78■□□□□ 0.28
CTSB-228ENST00000533455 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.78■□□□□ 0.28
CTSB-228ENST00000533455 RRN3P2A6NIE6 340 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 LRIG2O94898 1065 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 CCDC166P0CW27 439 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 SLC1A2P43004 574 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 IREB2P48200 963 aaKnown RBP16.77■□□□□ 0.28
CTSB-228ENST00000533455 CD151P48509 253 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 CXCR3P49682 368 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 PFKPQ01813 784 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 POU4F1Q01851 419 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 PPIL2Q13356 520 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 TECRLQ5HYJ1 363 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 RAB41Q5JT25 222 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 PM20D1Q6GTS8 502 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 DENND5AQ6IQ26 1287 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 HM13Q8TCT9 377 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 CCDC126Q96EE4 140 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 ELMO2Q96JJ3 720 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 OSMRQ99650 979 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
CTSB-228ENST00000533455 TRPV6Q9H1D0 765 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 SEMA6AQ9H2E6 1030 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 TRPC7Q9HCX4 862 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 SPAG4Q9NPE6 437 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 IGSF5Q9NSI5 407 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 IRAK4Q9NWZ3 460 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 TCAF1Q9Y4C2 921 aa16.77■□□□□ 0.28
CTSB-228ENST00000533455 PRORSD1PA6NEY8 169 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 PSMD12O00232 456 aaPredicted RBP16.77■□□□□ 0.27
CTSB-228ENST00000533455 UBDO15205 165 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 ANXA9O76027 345 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 MMP3P08254 477 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 EMP3P54852 163 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 DCTN2Q13561 401 aaKnown RBP16.77■□□□□ 0.27
CTSB-228ENST00000533455 CYTH1Q15438 398 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 C6orf10Q5SRN2 563 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 HMBOX1Q6NT76 420 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 ESRP1Q6NXG1 681 aaKnown RBP16.77■□□□□ 0.27
CTSB-228ENST00000533455 DCLRE1AQ6PJP8 1040 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 POTEHQ6S545 545 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 ERI1Q8IV48 349 aaKnown RBP16.77■□□□□ 0.27
CTSB-228ENST00000533455 HERC6Q8IVU3 1022 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 GFM2Q969S9 779 aaKnown RBP16.77■□□□□ 0.27
CTSB-228ENST00000533455 PBXIP1Q96AQ6 731 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 SLC25A23Q9BV35 468 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 ANKRD60Q9BZ19 345 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 EML4Q9HC35 981 aaKnown RBP16.77■□□□□ 0.27
CTSB-228ENST00000533455 TMEM181Q9P2C4 612 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 OR12D3Q9UGF7 316 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 CNOT6Q9ULM6 557 aaKnown RBP16.77■□□□□ 0.27
CTSB-228ENST00000533455 MYRFQ9Y2G1 1151 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 SNX10Q9Y5X0 201 aa16.77■□□□□ 0.27
CTSB-228ENST00000533455 SNRPB2P08579 225 aaKnown RBP16.76■□□□□ 0.27
CTSB-228ENST00000533455 NCAM1P13591 858 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 CCNCP24863 283 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 LRPAP1P30533 357 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 ATP4BP51164 291 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 GALNT1Q10472 559 aaPredicted RBP16.76■□□□□ 0.27
CTSB-228ENST00000533455 POU6F1Q14863 301 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 AGKQ53H12 422 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 MTX3Q5HYI7 312 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 SAMD4BQ5PRF9 694 aaKnown RBP16.76■□□□□ 0.27
CTSB-228ENST00000533455 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 KIAA0930Q6ICG6 404 aaPredicted RBP16.76■□□□□ 0.27
CTSB-228ENST00000533455 SPATA6LQ8N4H0 392 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 TRIML2Q8N7C3 387 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 ANKFN1Q8N957 763 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 DIS3LQ8TF46 1054 aaKnown RBP16.76■□□□□ 0.27
CTSB-228ENST00000533455 SMOQ99835 787 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 EFHD1Q9BUP0 239 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 CRTAC1Q9NQ79 661 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 TREX1Q9NSU2 369 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 OLAHQ9NV23 265 aa16.76■□□□□ 0.27
CTSB-228ENST00000533455 A0A0J9YVX5 310 aa16.75■□□□□ 0.27
CTSB-228ENST00000533455 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms