RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 IFT43Q96FT9 208 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SLC6A18Q96N87 628 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 KLHL32Q96NJ5 620 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 RNF157Q96PX1 679 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 MGME1Q9BQP7 344 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SLC32A1Q9H598 525 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SUV39H2Q9H5I1 410 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 ZDHHC6Q9H6R6 413 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 GAREM1Q9H706 876 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SP110Q9HB58 689 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 LUC7LQ9NQ29 371 aaKnown RBP9.96□□□□□ -0.82
NUP98-220ENST00000533346 TM7SF3Q9NS93 570 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 ETNK2Q9NVF9 386 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 PCDHA13Q9Y5I0 950 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 SNX11Q9Y5W9 270 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 ACACBO00763 2458 aa9.96□□□□□ -0.82
NUP98-220ENST00000533346 TPRP12270 2363 aaKnown RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 CHD6Q8TD26 2715 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 C3orf70A6NLC5 250 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 KRIT1O00522 736 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 TRAFD1O14545 582 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 WNT9AO14904 365 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 FLRT2O43155 660 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 PJA2O43164 708 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 HTRA2O43464 458 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 CBFA2T3O75081 653 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 NDUFA10O95299 355 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 UGT2B4P06133 528 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 TIMP2P16035 220 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 CES1P23141 567 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 GKP32189 559 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 GARSP41250 739 aaKnown RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 ABL2P42684 1182 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 AP1S1P61966 158 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 SLC10A7Q0GE19 358 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 ELP6Q0PNE2 266 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 KRT81Q14533 505 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 MESDQ14696 234 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 STAT4Q14765 748 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 SUZ12Q15022 739 aaKnown RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 SPA17Q15506 151 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 UGP2Q16851 508 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 PPM1JQ5JR12 505 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 ATXN7L2Q5T6C5 722 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 SLC9A4Q6AI14 798 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 TIGD7Q6NT04 549 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 ARHGAP36Q6ZRI8 547 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 ZNF354CQ86Y25 554 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 TP53INP2Q8IXH6 220 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 RHOT1Q8IXI2 618 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 BBS5Q8N3I7 341 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 PQLC3Q8N755 202 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 KCTD6Q8NC69 237 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 TSEN2Q8NCE0 465 aaKnown RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 UBE2Q2Q8WVN8 375 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 SNX19Q92543 992 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 HDAC11Q96DB2 347 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 SERAC1Q96JX3 654 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 NUDCD1Q96RS6 583 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 ELF4Q99607 663 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 KLF6Q99612 283 aaPredicted RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 GTPBP2Q9BX10 602 aaKnown RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 SLC17A9Q9BYT1 436 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 FSCN3Q9NQT6 498 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 DDX56Q9NY93 547 aaKnown RBP9.95□□□□□ -0.82
NUP98-220ENST00000533346 PPIL1Q9Y3C6 166 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 ALG6Q9Y672 507 aa9.95□□□□□ -0.82
NUP98-220ENST00000533346 CABIN1Q9Y6J0 2220 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 DFFAO00273 331 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
NUP98-220ENST00000533346 MUSKO15146 869 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 MATN3O15232 486 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 INSIG1O15503 277 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 BUB1BO60566 1050 aaPredicted RBP9.94□□□□□ -0.82
NUP98-220ENST00000533346 SOCS5O75159 536 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 DKK1O94907 266 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 MX2P20592 715 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 PMLP29590 882 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 SERPINA4P29622 427 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 RGRP47804 291 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 CCT8P50990 548 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 C21orf59P57076 290 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 POLR2LP62875 67 aaKnown RBP9.94□□□□□ -0.82
NUP98-220ENST00000533346 SHC2P98077 582 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 MMRN1Q13201 1228 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 FGL2Q14314 439 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 SHBQ15464 509 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 IFI16Q16666 785 aaKnown RBP9.94□□□□□ -0.82
NUP98-220ENST00000533346 POM121L1PQ3SYA9 428 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 MARC1Q5VT66 337 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 C11orf63Q6NUN7 778 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 KYAT3Q6YP21 454 aaKnown RBP9.94□□□□□ -0.82
NUP98-220ENST00000533346 LEKR1Q6ZMV7 388 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 TTC7BQ86TV6 843 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 CPNE8Q86YQ8 564 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 TMEM139Q8IV31 216 aa9.94□□□□□ -0.82
NUP98-220ENST00000533346 RAVER1Q8IY67 606 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms