RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 RHAGQ02094 409 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 SLC34A1Q06495 639 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 NAB1Q13506 487 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 SCARB2Q14108 478 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 SELPLGQ14242 412 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 RCN2Q14257 317 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 TRADDQ15628 312 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 AANATQ16613 207 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 MAPKAPK3Q16644 382 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 DGKDQ16760 1214 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 PFKFB4Q16877 469 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 LRIT3Q3SXY7 679 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 CT83Q5H943 113 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 DCAF17Q5H9S7 520 aaPredicted RBP5.59□□□□□ -1.51
CD44-236ENST00000533222 ERMARDQ5T6L9 678 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 CACHD1Q5VU97 1274 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 DUPD1Q68J44 220 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 PM20D1Q6GTS8 502 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 ELP2Q6IA86 826 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 SULT1C3Q6IMI6 304 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 FRMD7Q6ZUT3 714 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 OTOP2Q7RTS6 562 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 TRAPPC11Q7Z392 1133 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 KANSL1Q7Z3B3 1105 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 CPLX4Q7Z7G2 160 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 GLRX5Q86SX6 157 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 VSTM4Q8IW00 320 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 RIBC1Q8N443 379 aaPredicted RBP5.59□□□□□ -1.51
CD44-236ENST00000533222 TRPV1Q8NER1 839 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 OR5AN1Q8NGI8 311 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 PDCD6IPQ8WUM4 868 aaKnown RBP5.59□□□□□ -1.51
CD44-236ENST00000533222 SLC44A1Q8WWI5 657 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 RAPGEF5Q92565 580 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 FERMT2Q96AC1 680 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 ARL8AQ96BM9 186 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 SLC25A36Q96CQ1 311 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 MTMR8Q96EF0 704 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 PRICKLE1Q96MT3 831 aaPredicted RBP5.59□□□□□ -1.51
CD44-236ENST00000533222 BTBD9Q96Q07 612 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 WDR24Q96S15 920 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 SLC29A1Q99808 456 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 TRAF4Q9BUZ4 470 aaPredicted RBP5.59□□□□□ -1.51
CD44-236ENST00000533222 ACAT2Q9BWD1 397 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 PABPC3Q9H361 631 aaKnown RBP5.59□□□□□ -1.51
CD44-236ENST00000533222 MTG2Q9H4K7 406 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 THAP9Q9H5L6 903 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 STN1Q9H668 368 aaKnown RBP5.59□□□□□ -1.51
CD44-236ENST00000533222 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 PTPRHQ9HD43 1115 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 GGA3Q9NZ52 723 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 IGSF9Q9P2J2 1179 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 ANKMY1Q9P2S6 941 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 FTSJ1Q9UET6 329 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 DPP7Q9UHL4 492 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 ARHGAP26Q9UNA1 814 aa5.59□□□□□ -1.51
CD44-236ENST00000533222 CHD1O14646 1710 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MYO5CQ9NQX4 1742 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 A0A1B0GTQ1 180 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 A0A1W2PQ67 120 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 OR6C74A6NCV1 312 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 LRRIQ4A6NIV6 560 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TRIM75PA6NK02 468 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 ZNF233A6NK53 670 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 MTSS1O43312 755 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 CIDEAO60543 219 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 H2AFYO75367 372 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 SERPINI2O75830 405 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 DDNO94850 711 aaPredicted RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 UNC5CO95185 931 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 CSPG5O95196 566 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 PCDH8O95206 1070 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 DEXIO95424 95 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 OAS1P00973 400 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 OPN1LWP04000 364 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 LPLP06858 475 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 PDHA1P08559 390 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 HMOX1P09601 288 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 LTA4HP09960 611 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 TMEM11P17152 192 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 RAB4AP20338 218 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 DNAJB1P25685 340 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 CDC25CP30307 473 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TTKP33981 857 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 HCAR3P49019 387 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 FXR1P51114 621 aaKnown RBP eCLIP5.58□□□□□ -1.52
CD44-236ENST00000533222 PDE1AP54750 535 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 EIF3BP55884 814 aaKnown RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 PEX3P56589 373 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 IRX4P78413 519 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 BNC1Q01954 994 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TOP3AQ13472 1001 aaPredicted RBP5.58□□□□□ -1.52
CD44-236ENST00000533222 DMC1Q14565 340 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 GPR162Q16538 588 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 SLC39A12Q504Y0 691 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 BRMS1LQ5PSV4 323 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 C6orf163Q5TEZ5 329 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 RESP18Q5W5W9 173 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 TMEM200BQ69YZ2 307 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 APOA5Q6Q788 366 aa5.58□□□□□ -1.52
CD44-236ENST00000533222 DPP8Q6V1X1 898 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms