RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PAK1Q13153 545 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 TBR1Q16650 682 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 GDPD4Q6W3E5 623 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 ZNF783Q6ZMS7 281 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 PTRH1Q86Y79 214 aaKnown RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 ARL10Q8N8L6 244 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 ZSCAN1Q8NBB4 408 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 KYQ8NBH2 561 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 PCDH19Q8TAB3 1148 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 ASB12Q8WXK4 309 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 SHC3Q92529 594 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 USP7Q93009 1102 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 C18orf8Q96DM3 657 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 CFAP57Q96MR6 1250 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 TIGD1Q96MW7 591 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 HAPLN3Q96S86 360 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 EPAS1Q99814 870 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 LRRN3Q9H3W5 708 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 APEX2Q9UBZ4 518 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
COPB1-209ENST00000533096 LOXL2Q9Y4K0 774 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 MGAQ8IWI9 3026 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 CFAP46Q8IYW2 2715 aa13.21□□□□□ -0.29
COPB1-209ENST00000533096 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 A0A1W2PQM1 296 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
COPB1-209ENST00000533096 BUB1O43683 1085 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 TIMP2P16035 220 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 ITGB6P18564 788 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 PON1P27169 355 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 BLKP51451 505 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 HK3P52790 923 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
COPB1-209ENST00000533096 EXOC3L4Q17RC7 722 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 ALG11Q2TAA5 492 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 TAF3Q5VWG9 929 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 ZDHHC17Q8IUH5 632 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
COPB1-209ENST00000533096 TMEM35BQ8NCS4 154 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 DENND6BQ8NEG7 585 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 FAM46DQ8NEK8 389 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 ARHGEF26Q96DR7 871 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 LIN37Q96GY3 246 aaPredicted RBP13.2□□□□□ -0.3
COPB1-209ENST00000533096 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 TMEM74Q96NL1 305 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 C1QTNF7Q9BXJ2 289 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 EDEM3Q9BZQ6 932 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 STARD5Q9NSY2 213 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 OR1A2Q9Y585 309 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 PCDHGA7Q9Y5G6 932 aa13.2□□□□□ -0.3
COPB1-209ENST00000533096 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
COPB1-209ENST00000533096 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 SUV39H1O43463 412 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 RASGRP1O95267 797 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 TNFP01375 233 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 ALPIP09923 528 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 HTR1BP28222 390 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 FLT3P36888 993 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 MARSP56192 900 aaKnown RBP13.19□□□□□ -0.3
COPB1-209ENST00000533096 SRP54P61011 504 aaKnown RBP13.19□□□□□ -0.3
COPB1-209ENST00000533096 SRSF1Q07955 248 aaKnown RBP eCLIP13.19□□□□□ -0.3
COPB1-209ENST00000533096 EIF3IQ13347 325 aaKnown RBP13.19□□□□□ -0.3
COPB1-209ENST00000533096 MORC3Q14149 939 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 ARHGEF7Q14155 803 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 INPP5AQ14642 412 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 LRRC14Q15048 493 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 IRF4Q15306 451 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 CDO1Q16878 200 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 RAB6CQ53S08 254 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 PHF19Q5T6S3 580 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 XKR5Q6UX68 686 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 MACC1Q6ZN28 852 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 TAF8Q7Z7C8 310 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 ZSCAN30Q86W11 494 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 GKN2Q86XP6 184 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 TP53I13Q8NBR0 393 aaPredicted RBP13.19□□□□□ -0.3
COPB1-209ENST00000533096 OR2AP1Q8NGE2 309 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 CPA5Q8WXQ8 436 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 ARHGEF2Q92974 986 aaKnown RBP13.19□□□□□ -0.3
COPB1-209ENST00000533096 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 ISG20Q96AZ6 181 aaKnown RBP13.19□□□□□ -0.3
COPB1-209ENST00000533096 PGAP3Q96FM1 320 aaPredicted RBP13.19□□□□□ -0.3
COPB1-209ENST00000533096 RAB6CQ9H0N0 254 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 OR12D3Q9UGF7 316 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 MOSPD1Q9UJG1 213 aa13.19□□□□□ -0.3
COPB1-209ENST00000533096 D6RAR5 112 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 FAM72CH0Y354 149 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 AREL1O15033 823 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 NVLO15381 856 aaKnown RBP13.18□□□□□ -0.3
COPB1-209ENST00000533096 ITGB2P05107 769 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 LIPCP11150 499 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 SFTPCP11686 197 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 WT1P19544 449 aaPredicted RBP13.18□□□□□ -0.3
COPB1-209ENST00000533096 ETV5P41161 510 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 MTIF2P46199 727 aaKnown RBP13.18□□□□□ -0.3
COPB1-209ENST00000533096 RAD51Q06609 339 aa13.18□□□□□ -0.3
COPB1-209ENST00000533096 AMZ1Q400G9 498 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms