RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 OLFML1Q6UWY5 402 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 C11orf57Q6ZUT1 292 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 SLC26A9Q7LBE3 791 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 VASH2Q86V25 355 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 CCNJLQ8IV13 435 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 ZNF397Q8NF99 534 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 ATL2Q8NHH9 583 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 HTR3CQ8WXA8 447 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 PGAP3Q96FM1 320 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 FAM81BQ96LP2 452 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 CPXM1Q96SM3 734 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 TKTL2Q9H0I9 626 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 WDCPQ9H6R7 721 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 ATP13A1Q9HD20 1204 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 ANO10Q9NW15 660 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 AKAP7Q9P0M2 348 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 GULP1Q9UBP9 304 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 PNMA8BQ9ULN7 279 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-223ENST00000533079 STAP1Q9ULZ2 295 aa12.61□□□□□ -0.39
CAPN1-223ENST00000533079 TLN1Q9Y490 2541 aaKnown RBP12.6□□□□□ -0.39
CAPN1-223ENST00000533079 AREL1O15033 823 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 ZMPSTE24O75844 475 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 TM7SF2O76062 418 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 RASGRP1O95267 797 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 F9P00740 461 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 GLB1P16278 677 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 ITIH1P19827 911 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 HTR1BP28222 390 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 PPP1R2P41236 205 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 CXCR3P49682 368 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 ATP1A2P50993 1020 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
CAPN1-223ENST00000533079 ARF5P84085 180 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 STX1AQ16623 288 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 CCDC40Q4G0X9 1142 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 TFAP2DQ7Z6R9 452 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 VPS36Q86VN1 386 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 ZDHHC17Q8IUH5 632 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 FAM26EQ8N5C1 309 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 TP53I13Q8NBR0 393 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-223ENST00000533079 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 GPBAR1Q8TDU6 330 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 EPAS1Q99814 870 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 PIGVQ9NUD9 493 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 FOXJ2Q9P0K8 574 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 SIRPGQ9P1W8 387 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 HECAQ9UBI9 543 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-223ENST00000533079 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 GPR34Q9UPC5 381 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 ITM2BQ9Y287 266 aa12.6□□□□□ -0.39
CAPN1-223ENST00000533079 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
CAPN1-223ENST00000533079 LRP4O75096 1905 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 TRIM49BA6NDI0 452 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 C9orf172C9J069 976 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 PSMA7O14818 248 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 ENDOD1O94919 500 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 GSRP00390 522 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 DNA2P51530 1060 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 POLE2P56282 527 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 STIM1Q13586 685 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 POLD3Q15054 466 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-223ENST00000533079 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-223ENST00000533079 CT47A1Q5JQC4 288 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-223ENST00000533079 CERCAMQ5T4B2 595 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 OTUD1Q5VV17 481 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-223ENST00000533079 FOXR2Q6PJQ5 311 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 FAM183BPQ6ZVS7 135 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 SPRED1Q7Z699 444 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 ZFAND4Q86XD8 727 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 C1orf131Q8NDD1 294 aaKnown RBP12.59□□□□□ -0.39
CAPN1-223ENST00000533079 GPR156Q8NFN8 814 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 OR7D4Q8NG98 312 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 OR2AP1Q8NGE2 309 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 CXorf40AQ8TE69 158 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 PDLIM2Q96JY6 352 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 NPY6RQ99463 290 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 BPIFA3Q9BQP9 254 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 SLC12A9Q9BXP2 914 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 ZYG11BQ9C0D3 744 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 NAT10Q9H0A0 1025 aaKnown RBP12.59□□□□□ -0.39
CAPN1-223ENST00000533079 RETREG1Q9H6L5 497 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 GGT7Q9UJ14 662 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 MAN2B2Q9Y2E5 1009 aa12.59□□□□□ -0.39
CAPN1-223ENST00000533079 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
CAPN1-223ENST00000533079 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 GRAP2O75791 330 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 CELA2BP08218 269 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-223ENST00000533079 WT1P19544 449 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-223ENST00000533079 SUOXP51687 545 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 SNRPD1P62314 119 aaKnown RBP12.58□□□□□ -0.4
CAPN1-223ENST00000533079 CYP4F2P78329 520 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 SLC6A3Q01959 620 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 GNA12Q03113 381 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 NFATC4Q14934 902 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 ALG11Q2TAA5 492 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 HID1Q8IV36 788 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms