RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TUBGCP5Q96RT8 1024 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 CINPQ9BW66 212 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 MIR1-1HGQ9H1L0 117 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 SUSD2Q9UGT4 822 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 GGT7Q9UJ14 662 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 TMEM131Q92545 1883 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 PCNX2A6NKB5 2137 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 TP53BP1Q12888 1972 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 A0A1W2PQU0 124 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 MACROD2A1Z1Q3 448 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 ARHGAP33O14559 1287 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 APOL1O14791 398 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 RNGTTO60942 597 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 ENGP17813 658 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 RENBPP51606 427 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 RACK1P63244 317 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 RAD51Q06609 339 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 PPIDQ08752 370 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 LLGL1Q15334 1064 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 FAM182AQ5T1J6 154 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 MARC1Q5VT66 337 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 ALG1LQ6GMV1 187 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 FBXL19Q6PCT2 694 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 ZNF662Q6ZS27 426 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 RABEPKQ7Z6M1 372 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 HORMAD1Q86X24 394 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 CNTD1Q8N815 330 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 C12orf50Q8NA57 414 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 CCDC112Q8NEF3 446 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 RAB7BQ96AH8 199 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 SLC6A18Q96N87 628 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 NUDCD1Q96RS6 583 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 LGMNQ99538 433 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 NOD2Q9HC29 1040 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 DYRK4Q9NR20 520 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 SAE1Q9UBE0 346 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 TPX2Q9ULW0 747 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 CAPN6Q9Y6Q1 641 aa14.09□□□□□ -0.15
TSPAN4-220ENST00000532375 SLC30A4O14863 429 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 DDX3YO15523 660 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 HTRA2O43464 458 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 CST8O60676 142 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 CFIP05156 583 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 GNSP15586 552 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 PECAM1P16284 738 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 MX2P20592 715 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 MAT2AP31153 395 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 HSPA9P38646 679 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 MMP13P45452 471 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 CSNK1EP49674 416 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 SCNN1BP51168 640 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 MAXP61244 160 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 AP1S1P61966 158 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 CCDC15Q0P6D6 951 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 GRM3Q14832 879 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 PPP2R5EQ16537 467 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 UGP2Q16851 508 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 RSPO4Q2I0M5 234 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 AASDHQ4L235 1098 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 TFDP3Q5H9I0 405 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 STPG1Q5TH74 334 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 SEL1L3Q68CR1 1132 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 LAYNQ6UX15 382 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 TTC7BQ86TV6 843 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 RFX6Q8HWS3 928 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 RNF10Q8N5U6 811 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 TMEM145Q8NBT3 493 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 OR2I1PQ8NGU4 316 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 ARRDC2Q8TBH0 407 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 NETO1Q8TDF5 533 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 SNX19Q92543 992 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 IL12RB2Q99665 862 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 EDEM2Q9BV94 578 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 C1QTNF2Q9BXJ5 285 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 NUSAP1Q9BXS6 441 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 MAK16Q9BXY0 300 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 ITM2BQ9Y287 266 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 ATP8A1Q9Y2Q0 1164 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 HEY1Q9Y5J3 304 aa14.08□□□□□ -0.16
TSPAN4-220ENST00000532375 CNOT1A5YKK6 2376 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 A0A1B0GVT2 93 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 CCDC66A2RUB6 948 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 C4orf47A7E2U8 309 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 PYGMP11217 842 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 CCNB1P14635 433 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 ZFXP17010 805 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 PTPN7P35236 360 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 GRIA4P48058 902 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 AFF3P51826 1226 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 NAP1L1P55209 391 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 IFI35P80217 286 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 GRIK2Q13002 908 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 ZBTB17Q13105 803 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 TFDP2Q14188 446 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 ZNF235Q14590 738 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 TMEM52BQ4KMG9 183 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 LRRC73Q5JTD7 316 aa14.07□□□□□ -0.16
TSPAN4-220ENST00000532375 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms