RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 AP1S1P61966 158 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 PPP2CBP62714 309 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 RPS21P63220 83 aaKnown RBP10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 PPP2CAP67775 309 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 OVGP1Q12889 678 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 FOXC1Q12948 553 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 GRIK2Q13002 908 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 LBRQ14739 615 aaKnown RBP10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 TEAD4Q15561 434 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 IFI16Q16666 785 aaKnown RBP10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 SETMARQ53H47 684 aaPredicted RBP10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 ALG1LQ6GMV1 187 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 NAPEPLDQ6IQ20 393 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 KIAA1161Q6NSJ0 714 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 FBXL19Q6PCT2 694 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 PIP4P1Q86T03 277 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 SRLQ86TD4 932 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 KATNAL2Q8IYT4 538 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 PLD5Q8N7P1 536 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 MFSD2AQ8NA29 543 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 TMEM145Q8NBT3 493 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 FAM174AQ8TBP5 190 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 FEM1CQ96JP0 617 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 KLHL32Q96NJ5 620 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 MGME1Q9BQP7 344 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 SUV39H2Q9H5I1 410 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 LRRK1Q38SD2 2015 aa10.94□□□□□ -0.66
GPATCH4-216ENST00000531900 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 A0A1W2PQ67 120 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 A0A1W2PQU0 124 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 LRRD1A4D1F6 860 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CFAP69A5D8W1 941 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 FAM47DPA6NHR8 397 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 TMEM110-MUSTN1A8MSY1 372 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 GOLGA6L6A8MZA4 724 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 PRAMEF26H0Y7S4 382 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 TRAFD1O14545 582 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 MUSKO15146 869 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 MATN3O15232 486 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 INSIG1O15503 277 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 SPINT1O43278 529 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 SPOPO43791 374 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 MFSD11O43934 449 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 DFNA5O60443 496 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 TIMP2P16035 220 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 ZFXP17010 805 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CES1P23141 567 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CD38P28907 300 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CDKN2BP42772 138 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CTSKP43235 329 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 RGRP47804 291 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CSNK1EP49674 416 aaKnown RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 SLC10A2Q12908 348 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 AGERQ15109 404 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 ZNF423Q2M1K9 1284 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 ZNF284Q2VY69 593 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 POM121L1PQ3SYA9 428 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 TIGD7Q6NT04 549 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 BRAT1Q6PJG6 821 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 BBS5Q8N3I7 341 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 TXLNBQ8N3L3 684 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 RYBPQ8N488 228 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 ATPAF2Q8N5M1 289 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 LRRC57Q8N9N7 239 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 OR6K2Q8NGY2 324 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 SKA1Q96BD8 255 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 HDAC11Q96DB2 347 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 OLFM3Q96PB7 478 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 LENG8Q96PV6 779 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 NUDCD1Q96RS6 583 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CINPQ9BW66 212 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 C1QTNF2Q9BXJ5 285 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 LACRTQ9GZZ8 138 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 BRD8Q9H0E9 1235 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 ERVMER34-1Q9H9K5 563 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 DTLQ9NZJ0 730 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 TFR2Q9UP52 801 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 ZFR2Q9UPR6 939 aaKnown RBP10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 EFR3BQ9Y2G0 817 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 ANKRD6Q9Y2G4 727 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 PCDHB9Q9Y5E1 797 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 PCDHGB2Q9Y5G2 931 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 HS3ST3A1Q9Y663 406 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 EPG5Q9HCE0 2579 aa10.93□□□□□ -0.66
GPATCH4-216ENST00000531900 CEP295Q9C0D2 2601 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 HTRA2O43464 458 aaPredicted RBP10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 MAGEC1O60732 1142 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 SOCS5O75159 536 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 TRIM16O95361 564 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 CER1O95813 267 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 WNT1P04628 370 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 SERPINA4P29622 427 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 ABL2P42684 1182 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 NR2C2P49116 596 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 SIM1P81133 766 aaPredicted RBP10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 GBE1Q04446 702 aa10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 PPIDQ08752 370 aaKnown RBP10.92□□□□□ -0.66
GPATCH4-216ENST00000531900 UGP2Q16851 508 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms