RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CTHRC1Q96CG8 243 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PAFAH2Q99487 392 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SEPT5Q99719 369 aaPredicted RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 NYXQ9GZU5 481 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 MMP27Q9H306 513 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PLK3Q9H4B4 646 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 GLOD4Q9HC38 313 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ZBTB40Q9NUA8 1239 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 HSFX1Q9UBD0 423 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CRNNQ9UBG3 495 aaPredicted RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 DKK3Q9UBP4 350 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 KCNE5Q9UJ90 142 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC25A13Q9UJS0 675 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 ADAMTS6Q9UKP5 1117 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 SH2B3Q9UQQ2 575 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 PIN4Q9Y237 131 aaKnown RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 WBP11Q9Y2W2 641 aaKnown RBP4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 CMAHPQ9Y471 501 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 NFS1Q9Y697 457 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 AP1M2Q9Y6Q5 423 aa4.46□□□□□ -1.7
AC055878.1-201ENST00000531858 EDDM13A0A1B0GTR0 161 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 A0A1B0GTW7 788 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 A0A1B0GVM2 712 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 FAM86B1E9PN63 330 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC16A3O15427 465 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 STRNO43815 780 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 SEC31AO94979 1220 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 GPANK1O95872 356 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 ONECUT2O95948 504 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 CYP1A1P04798 512 aaPredicted RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 LYL1P12980 280 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 GPTP24298 496 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 GKP32189 559 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 PRPHP41219 470 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 TDO2P48775 406 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 ZNF81P51508 661 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 ARSEP51690 589 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 CDR1P51861 262 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 GMFBP60983 142 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 POLR2FP61218 127 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 HMGN5P82970 282 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 FPGSQ05932 587 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 CXCL9Q07325 125 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 NPRL3Q12980 569 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 RCN2Q14257 317 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 ERCC6LQ2NKX8 1250 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 AP5B1Q2VPB7 878 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 MYLK3Q32MK0 819 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 ZNF789Q5FWF6 425 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 METRNLQ641Q3 311 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 SP5Q6BEB4 398 aaPredicted RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 ETFRF1Q6IPR1 90 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 KDELC1Q6UW63 502 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 C15orf39Q6ZRI6 1047 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 NEK8Q86SG6 692 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 DSG4Q86SJ6 1040 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 CAND1Q86VP6 1230 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 HOOK3Q86VS8 718 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 LAS2Q8IYD9 372 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 ZBTB44Q8NCP5 570 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 OR10S1Q8NGN2 331 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 RBM18Q96H35 190 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 WDYHV1Q96HA8 205 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 TMEM176AQ96HP8 235 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 MPHOSPH9Q99550 1183 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 SRSF8Q9BRL6 282 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 CADM1Q9BY67 442 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 AMBRA1Q9C0C7 1298 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 HSD3B7Q9H2F3 369 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 POLE3Q9NRF9 147 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC6A13Q9NSD5 602 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 MCM9Q9NXL9 1143 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 VPS18Q9P253 973 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 HDAC6Q9UBN7 1215 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 CHKBQ9Y259 395 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 AAR2Q9Y312 384 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 REXO2Q9Y3B8 237 aaKnown RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 PKP3Q9Y446 797 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 EPN1Q9Y6I3 576 aaPredicted RBP4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 PMF1-BGLAPU3KQ54 211 aa4.45□□□□□ -1.7
AC055878.1-201ENST00000531858 TEX51A0A1B0GUA7 166 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 OR6C68A6NDL8 312 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC9B1P1A6NJY1 282 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 TTC34A8MYJ7 566 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 KDM4EB2RXH2 506 aaPredicted RBP4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 SPRY2O43597 315 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 MOSPD3O75425 235 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 PMPCBO75439 489 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 PALMO75781 387 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 FARP2O94887 1054 aaPredicted RBP4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 TRIM16O95361 564 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 SERPINC1P01008 464 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 ZFYP08048 801 aaPredicted RBP4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 CYP2A6P11509 494 aaPredicted RBP4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 CREB1P16220 341 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 CTPS1P17812 591 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 CXCR5P32302 372 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 SOAT1P35610 550 aa4.44□□□□□ -1.7
AC055878.1-201ENST00000531858 LUMP51884 338 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms