RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SUOXP51687 545 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 NEK3P51956 506 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 EIF3EP60228 445 aaKnown RBP14.62□□□□□ -0.07
CPSF1-206ENST00000531480 MAXP61244 160 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 CCDC15Q0P6D6 951 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 OASLQ15646 514 aaKnown RBP14.62□□□□□ -0.07
CPSF1-206ENST00000531480 DRICH1Q6PGQ1 229 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-206ENST00000531480 BRAT1Q6PJG6 821 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 PARS2Q7L3T8 475 aaKnown RBP14.62□□□□□ -0.07
CPSF1-206ENST00000531480 HTR3CQ8WXA8 447 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 RAB7BQ96AH8 199 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 KLHL32Q96NJ5 620 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 WDR24Q96S15 920 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 OMDQ99983 421 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 ATP13A3Q9H7F0 1226 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.62□□□□□ -0.07
CPSF1-206ENST00000531480 SNX12Q9UMY4 172 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 INVSQ9Y283 1065 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 A0A1W2PQ67 120 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 PLK4O00444 970 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 AREL1O15033 823 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 SPINT1O43278 529 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 RHOBTB1O94844 696 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 PIGNO95427 931 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 SEMA4FO95754 770 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 MMP2P08253 660 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 RBL1P28749 1068 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 SERPINA4P29622 427 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 CD68P34810 354 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 NIPAL4Q0D2K0 466 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 CCDC181Q5TID7 509 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 PEAR1Q5VY43 1037 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 PAPD7Q5XG87 772 aaKnown RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 NEK5Q6P3R8 708 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 B4GALNT4Q76KP1 1039 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 CAMK1DQ8IU85 385 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 SLC41A1Q8IVJ1 513 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 CDKL3Q8IVW4 592 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 RYBPQ8N488 228 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 OR2T34Q8NGX1 318 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 KIF18AQ8NI77 898 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 RTP4Q96DX8 246 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 IMP4Q96G21 291 aaKnown RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 OSBPL9Q96SU4 736 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 SEMA3CQ99985 751 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 PREBQ9HCU5 417 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 SCUBE2Q9NQ36 999 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 DYRK4Q9NR20 520 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 TPX2Q9ULW0 747 aaKnown RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 SMG5Q9UPR3 1016 aaKnown RBP14.61□□□□□ -0.07
CPSF1-206ENST00000531480 PPIL1Q9Y3C6 166 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 DOCK9Q9BZ29 2069 aa14.61□□□□□ -0.07
CPSF1-206ENST00000531480 ZNF292O60281 2723 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 FAM186AA6NE01 2351 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 LRRK1Q38SD2 2015 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 TTC24A2A3L6 582 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-206ENST00000531480 METTL12A8MUP2 240 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 LATO43561 262 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 LIASO43766 372 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 FGGP02679 453 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 TIMP2P16035 220 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 CXCR5P32302 372 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 CCR5P51681 352 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 GNG11P61952 73 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 DSC2Q02487 901 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 RPL6Q02878 288 aaKnown RBP14.6□□□□□ -0.07
CPSF1-206ENST00000531480 BCL2L1Q07817 233 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 ELF2Q15723 593 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 CCNG2Q16589 344 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 UGP2Q16851 508 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 POM121L1PQ3SYA9 428 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 LAIR1Q6GTX8 287 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 CEP68Q76N32 757 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 LPCAT2Q7L5N7 544 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 PRPF39Q86UA1 669 aaKnown RBP14.6□□□□□ -0.07
CPSF1-206ENST00000531480 FAM124AQ86V42 546 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 TRIM69Q86WT6 500 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 ZSWIM9Q86XI8 627 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 KLHDC8BQ8IXV7 354 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 ZNF567Q8N184 647 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 C1orf216Q8TAB5 229 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 ACTRT1Q8TDG2 376 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 MAIP1Q8WWC4 291 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 DNASE2BQ8WZ79 361 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 FOXJ1Q92949 421 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 ORAI3Q9BRQ5 295 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 GPR174Q9BXC1 333 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 SLC25A51Q9H1U9 297 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 C6orf106Q9H6K1 298 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-206ENST00000531480 GLOD4Q9HC38 313 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 TRHDEQ9UKU6 1024 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 DNPEPQ9ULA0 475 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-206ENST00000531480 FADS3Q9Y5Q0 445 aa14.6□□□□□ -0.07
CPSF1-206ENST00000531480 TRPM6Q9BX84 2022 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 CFAP69A5D8W1 941 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 C5orf60A6NFR6 353 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 LRRC72A6NJI9 287 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms