RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 SLFN11Q7Z7L1 901 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 PHF13Q86YI8 300 aaPredicted RBP12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 PYROXD2Q8N2H3 581 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 RTL3Q8N8U3 475 aaKnown RBP12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 ZNF248Q8NDW4 579 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 CASKIN2Q8WXE0 1202 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 SLC39A7Q92504 469 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 GDAP1L1Q96MZ0 367 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 LGMNQ99538 433 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 SELENOOQ9BVL4 669 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 TTYH3Q9C0H2 523 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 KLC2Q9H0B6 622 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 POLR1BQ9H9Y6 1135 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 GRPEL1Q9HAV7 217 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 SPASTQ9UBP0 616 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 SIK3Q9Y2K2 1263 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 MFHAS1Q9Y4C4 1052 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 DAAM1Q9Y4D1 1078 aa12.98□□□□□ -0.33
TM9SF1-211ENST00000531406 EME2A4GXA9 379 aaPredicted RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 SIGLEC16A6NMB1 481 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 MMP20O60882 483 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 GCATO75600 419 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 IGSF6O95976 241 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 CALB1P05937 261 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 TIMP2P16035 220 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 ITIH2P19823 946 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 TGM2P21980 687 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 EPHB2P29323 1055 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 IGFALSP35858 605 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 THOP1P52888 689 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 GSCP56915 257 aaPredicted RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 PCBP4P57723 403 aaKnown RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 ERVPABLB-1P60509 514 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 RHOAP61586 193 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 YPEL5P62699 121 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 RAD51Q06609 339 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 C19orf57Q0VDD7 668 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 PTK2BQ14289 1009 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 IQCB1Q15051 598 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 SYCP1Q15431 976 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 ISXQ2M1V0 245 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 INO80DQ53TQ3 878 aaPredicted RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 ZNF354CQ86Y25 554 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 RBFAQ8N0V3 343 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 NETO2Q8NC67 525 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 LSM14AQ8ND56 463 aaKnown RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 C3orf20Q8ND61 904 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 ANKRD20A12PQ8NF67 263 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 IL12RB2Q99665 862 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 TCEAL2Q9H3H9 227 aaPredicted RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 MBNL1Q9NR56 388 aaKnown RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 FANCLQ9NW38 375 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 DKK3Q9UBP4 350 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 APOBEC3BQ9UH17 382 aaKnown RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 PNMA8BQ9ULN7 279 aaPredicted RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 KNTC1P50748 2209 aa12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 ARID1BQ8NFD5 2236 aaPredicted RBP12.97□□□□□ -0.33
TM9SF1-211ENST00000531406 TEX51A0A1B0GUA7 166 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 A0A1W2PNU3 283 aaPredicted RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 RASA4BC9J798 803 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 LMO7DNF2Z398 122 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 RASA4O43374 803 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 KALRNO60229 2985 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 TM7SF2O76062 418 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 RPIAP49247 311 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 ZNF143P52747 638 aaPredicted RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 YBEYP58557 167 aaPredicted RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 CXADRP78310 365 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 SERINC3Q13530 473 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 C1orf61Q13536 156 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 NR0B2Q15466 257 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 PRRT3Q5FWE3 981 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 SCYL2Q6P3W7 929 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 MON1BQ7L1V2 547 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 PHACTR4Q8IZ21 702 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 TP53I13Q8NBR0 393 aaPredicted RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 TPCN2Q8NHX9 752 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 CXorf40AQ8TE69 158 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 GRAMD1AQ96CP6 724 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 HMCESQ96FZ2 354 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 NAF1Q96HR8 494 aaKnown RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 TBATAQ96M53 351 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 EPAS1Q99814 870 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 WRAP53Q9BUR4 548 aaKnown RBP12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 LRRC61Q9BV99 259 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 BOCQ9BWV1 1114 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 C1QTNF7Q9BXJ2 289 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 SLC13A1Q9BZW2 595 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 ASCL3Q9NQ33 180 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 LHX3Q9UBR4 397 aa12.96□□□□□ -0.33
TM9SF1-211ENST00000531406 TCRBV5S1A1TA0A578 114 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 WASH4PA8MWX3 477 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 TOR1BO14657 336 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 MUSKO15146 869 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 YY2O15391 372 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms