RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 NTN3O00634 580 aaPredicted RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 AP1G1O43747 822 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 TNFSF15O95150 251 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 JUNDP17535 347 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 ERCC5P28715 1186 aaPredicted RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 L1CAMP32004 1257 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 FLT3P36888 993 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 RABIFP47224 123 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 DUSP3P51452 185 aaPredicted RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 TGIF1Q15583 401 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 ARHGAP44Q17R89 818 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 ARL13BQ3SXY8 428 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 C2CD6Q53TS8 623 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 LRRC73Q5JTD7 316 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 ATG14Q6ZNE5 492 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 RBM44Q6ZP01 1051 aaKnown RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC47A2Q86VL8 602 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 DCP2Q8IU60 420 aaKnown RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 VSTM4Q8IW00 320 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 ENOX1Q8TC92 643 aaKnown RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 LMX1AQ8TE12 382 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 FUBP1Q96AE4 644 aaKnown RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 CENPTQ96BT3 561 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 PGAP3Q96FM1 320 aaPredicted RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 LENG8Q96PV6 779 aaPredicted RBP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 CEP44Q9C0F1 390 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 WDCPQ9H6R7 721 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 DYRK4Q9NR20 520 aa9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.35□□□□□ -0.91
CHMP4A-205ENST00000531158 A0A1W2PQM1 296 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 C16orf96A6NNT2 1141 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 TPP1O14773 563 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 AREL1O15033 823 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 YY2O15391 372 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 TCEA3O75764 348 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 HGFP14210 728 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 ITGB6P18564 788 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 ITIH2P19823 946 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 CR2P20023 1033 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 RBMS1P29558 406 aaKnown RBP9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 OR1E1P30953 314 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 ACVRL1P37023 503 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 USP8P40818 1118 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 SULT1E1P49888 294 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 ADKP55263 362 aaKnown RBP9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 NFKB2Q00653 900 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 GNA12Q03113 381 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 CARD16Q5EG05 197 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 BRMS1LQ5PSV4 323 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 CCDC81Q6ZN84 652 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 IRF2BP1Q8IU81 584 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 SFTPA2Q8IWL1 248 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 PHACTR4Q8IZ21 702 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 PCDH20Q8N6Y1 951 aaKnown RBP9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 ANKRD7Q92527 254 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 PPP1R16AQ96I34 528 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 C1orf74Q96LT6 269 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 CCDC114Q96M63 670 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 CCDC3Q9BQI4 270 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 HEPHQ9BQS7 1158 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 SPON2Q9BUD6 331 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 TM6SF2Q9BZW4 377 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 ZDHHC6Q9H6R6 413 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 MBNL1Q9NR56 388 aaKnown RBP9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 APEX2Q9UBZ4 518 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 SEPT3Q9UH03 358 aa9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 APOBEC3BQ9UH17 382 aaKnown RBP9.34□□□□□ -0.91
CHMP4A-205ENST00000531158 CCDC187A0A096LP49 1063 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 ILVBLA1L0T0 632 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 LMO7DNF2Z398 122 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 H3BM21 787 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 FOXN3O00409 490 aaPredicted RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 FPGTO14772 594 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 SRGAP2O75044 1071 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 SERPINC1P01008 464 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 ITGA2BP08514 1039 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 TSHRP16473 764 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 PON1P27169 355 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 CDH5P33151 784 aaPredicted RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 UBASH3AP57075 661 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 RNASE9P60153 205 aaKnown RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 DEUP1Q05D60 604 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 PAK1Q13153 545 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 MTA1Q13330 715 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 STIM1Q13586 685 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 NR0B2Q15466 257 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 TCEA2Q15560 299 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 SLC25A52Q3SY17 297 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 PRRT3Q5FWE3 981 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 MANEALQ5VSG8 457 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 LEKR1Q6ZMV7 388 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 ENOSF1Q7L5Y1 443 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 XYLT1Q86Y38 959 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 KYQ8NBH2 561 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 TP53I13Q8NBR0 393 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms