RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CPEB1Q9BZB8 566 aaKnown RBP15.98■□□□□ 0.15
CPSF1-205ENST00000531042 TAS2R14Q9NYV8 317 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 DKK3Q9UBP4 350 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 LHX3Q9UBR4 397 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 MYO6Q9UM54 1294 aa15.98■□□□□ 0.15
CPSF1-205ENST00000531042 INSIG1O15503 277 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 TEX33O43247 280 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 AQP9O43315 295 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 BRINP1O60477 761 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 MMP20O60882 483 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 TM7SF2O76062 418 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 JUNDP17535 347 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 DESP17661 470 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 ITIH2P19823 946 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 TNFAIP3P21580 790 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 HTR7P34969 479 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 IGFALSP35858 605 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 ABCG1P45844 678 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 TYRO3Q06418 890 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 MAMLD1Q13495 774 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 PTK2BQ14289 1009 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 CYTH1Q15438 398 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 PPP1R2P3Q6NXS1 205 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 ZCCHC8Q6NZY4 707 aaKnown RBP15.97■□□□□ 0.15
CPSF1-205ENST00000531042 VPS36Q86VN1 386 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 SNIP1Q8TAD8 396 aaKnown RBP15.97■□□□□ 0.15
CPSF1-205ENST00000531042 CXorf40AQ8TE69 158 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 BTN2A2Q8WVV5 523 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 LRRC19Q9H756 370 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 EVA1BQ9NVM1 165 aa15.97■□□□□ 0.15
CPSF1-205ENST00000531042 MBD3O95983 291 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 ITPKBP27987 946 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 SUOXP51687 545 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 NDST2P52849 883 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 THOP1P52888 689 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 TPI1P60174 286 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 YPEL5P62699 121 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 KLHL40Q2TBA0 621 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 LRRC69Q6ZNQ3 347 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 DNAAF5Q86Y56 855 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 TP53I13Q8NBR0 393 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-205ENST00000531042 IFI44Q8TCB0 444 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 HCAR2Q8TDS4 363 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 LMX1AQ8TE12 382 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 FGF11Q92914 225 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 EXOC2Q96KP1 924 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 C1QTNF7Q9BXJ2 289 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 PDFQ9HBH1 243 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 RTN4Q9NQC3 1192 aaKnown RBP15.96■□□□□ 0.15
CPSF1-205ENST00000531042 MBNL1Q9NR56 388 aaKnown RBP15.96■□□□□ 0.15
CPSF1-205ENST00000531042 PARVAQ9NVD7 372 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 DONSONQ9NYP3 566 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 UBA2Q9UBT2 640 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-205ENST00000531042 SALL4Q9UJQ4 1053 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 PNMA8BQ9ULN7 279 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-205ENST00000531042 PCDHB1Q9Y5F3 818 aa15.96■□□□□ 0.15
CPSF1-205ENST00000531042 LRRK1Q38SD2 2015 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 SMG1Q96Q15 3661 aaKnown RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 BAHCC1Q9P281 2608 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 TMCO5BA8MYB1 307 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 J3KR12 359 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 TOR1BO14657 336 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 RIOK3O14730 519 aaKnown RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 TPP1O14773 563 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 RRP8O43159 456 aaKnown RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 PIGNO95427 931 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 PSMA2P25787 234 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 GRM3Q14832 879 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 DEFB133Q30KQ1 61 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 TMEM52BQ4KMG9 183 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 PLEKHA7Q6IQ23 1121 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 RBFAQ8N0V3 343 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 ARFGAP1Q8N6T3 406 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 BBC3Q96PG8 261 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 DEPDC7Q96QD5 511 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 IL12RB2Q99665 862 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 NCAPGQ9BPX3 1015 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 WRAP53Q9BUR4 548 aaKnown RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 ABCG4Q9H172 646 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 TCEAL2Q9H3H9 227 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 SUV39H2Q9H5I1 410 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 NCKIPSDQ9NZQ3 722 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 SPASTQ9UBP0 616 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 APOBEC3BQ9UH17 382 aaKnown RBP15.95■□□□□ 0.14
CPSF1-205ENST00000531042 AP4E1Q9UPM8 1137 aa15.95■□□□□ 0.14
CPSF1-205ENST00000531042 BPTFQ12830 3046 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 TSPAN11A1L157 253 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 LRRC53A6NM62 1247 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 EIF3CLB5ME19 914 aaKnown RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 EEF2KO00418 725 aaKnown RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 ATMINO43313 823 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 PRAMEF11O60813 436 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 GCATO75600 419 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 XPAP23025 273 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 ACTN2P35609 894 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 EIF4A3P38919 411 aaKnown RBP15.94■□□□□ 0.14
CPSF1-205ENST00000531042 ELP6Q0PNE2 266 aa15.94■□□□□ 0.14
CPSF1-205ENST00000531042 CDKN3Q16667 212 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms