RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RABGAP1Q9Y3P9 1069 aa4.85□□□□□ -1.63
C11orf88-204ENST00000529661 RPS6KL1Q9Y6S9 549 aa4.85□□□□□ -1.63
C11orf88-204ENST00000529661 TEX13CA0A0J9YWL9 993 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 ARHGAP10A1A4S6 786 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 TAF4O00268 1085 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 TIMM44O43615 452 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 SEC14L2O76054 403 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 CCNDBP1O95273 360 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 ADAP00813 363 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 LCKP06239 509 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 GALTP07902 379 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 SPARCP09486 303 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 ALOX12P18054 663 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 TBXAS1P24557 533 aaPredicted RBP4.84□□□□□ -1.63
C11orf88-204ENST00000529661 TKTP29401 623 aaKnown RBP4.84□□□□□ -1.63
C11orf88-204ENST00000529661 CHRNA5P30532 468 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 FMO4P31512 558 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 ARL3P36405 182 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 RARSP54136 660 aaKnown RBP4.84□□□□□ -1.63
C11orf88-204ENST00000529661 P2RX3P56373 397 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 ALG10Q5BKT4 473 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 ALG10BQ5I7T1 473 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 FAM171A1Q5VUB5 890 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 TBC1D9BQ66K14 1250 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 KLHL24Q6TFL4 600 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 IL20RBQ6UXL0 311 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 TADA2BQ86TJ2 420 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 CCDC25Q86WR0 208 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 GHDCQ8N2G8 530 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 LPAR1Q92633 364 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 KLHL29Q96CT2 875 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 PERPQ96FX8 193 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 CCDC68Q9H2F9 335 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 EIF2B3Q9NR50 452 aaKnown RBP4.84□□□□□ -1.63
C11orf88-204ENST00000529661 BABAM1Q9NWV8 329 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 HCFC1R1Q9NWW0 138 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 POLG2Q9UHN1 485 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 SLCO3A1Q9UIG8 710 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 LYVE1Q9Y5Y7 322 aa4.84□□□□□ -1.63
C11orf88-204ENST00000529661 ADGRF5Q8IZF2 1346 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 FIBPO43427 364 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 TACC1O75410 805 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 NEURL1O76050 574 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 CBX6O95503 412 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 CDC25AP30304 524 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 CYP2J2P51589 502 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 NEXNQ0ZGT2 675 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 TMEM115Q12893 351 aaPredicted RBP4.83□□□□□ -1.64
C11orf88-204ENST00000529661 CCNG2Q16589 344 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 GSTA3Q16772 222 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 ENTPD8Q5MY95 495 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 ASPHD1Q5U4P2 390 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 CDC73Q6P1J9 531 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 BHLHA9Q7RTU4 235 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 RPAP2Q8IXW5 612 aaPredicted RBP4.83□□□□□ -1.64
C11orf88-204ENST00000529661 CNTROBQ8N137 903 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 DNAAF1Q8NEP3 725 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 TMEM170AQ8WVE7 144 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 FAR1Q8WVX9 515 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 NSUN4Q96CB9 384 aaKnown RBP4.83□□□□□ -1.64
C11orf88-204ENST00000529661 CAMK1GQ96NX5 476 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 SERINC2Q96SA4 455 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 PIP5K1AQ99755 562 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 HEMGNQ9BXL5 484 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 GLIS2Q9BZE0 524 aaPredicted RBP4.83□□□□□ -1.64
C11orf88-204ENST00000529661 HIPK3Q9H422 1215 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 TASP1Q9H6P5 420 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 PRKRIP1Q9H875 184 aaPredicted RBP4.83□□□□□ -1.64
C11orf88-204ENST00000529661 MRPL44Q9H9J2 332 aaKnown RBP4.83□□□□□ -1.64
C11orf88-204ENST00000529661 ZNF304Q9HCX3 659 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 HAUS2Q9NVX0 235 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 KIAA1456Q9P272 454 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.83□□□□□ -1.64
C11orf88-204ENST00000529661 PCDHGB5Q9Y5G0 923 aa4.83□□□□□ -1.64
C11orf88-204ENST00000529661 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.82□□□□□ -1.64
C11orf88-204ENST00000529661 FAM157AC9JC47 383 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 GTPBP1O00178 669 aaKnown RBP4.82□□□□□ -1.64
C11orf88-204ENST00000529661 LDLRAD4O15165 306 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 IL1AP01583 271 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 HEXAP06865 529 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 HOXB2P14652 356 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 TM4SF1P30408 202 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 CDKN2AP42771 156 aaKnown RBP4.82□□□□□ -1.64
C11orf88-204ENST00000529661 CTCFP49711 727 aaPredicted RBP4.82□□□□□ -1.64
C11orf88-204ENST00000529661 ARSFP54793 590 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 ATG9BQ674R7 924 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 MOB3CQ70IA8 216 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 IKBIPQ70UQ0 350 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 KDELC2Q7Z4H8 507 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 FAM160B2Q86V87 743 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 GPSM1Q86YR5 675 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 TTC39CQ8N584 583 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 ERP27Q96DN0 273 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 MAP7D2Q96T17 732 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 NUDT16L1Q9BRJ7 211 aaKnown RBP4.82□□□□□ -1.64
C11orf88-204ENST00000529661 IFT27Q9BW83 186 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 RBM38Q9H0Z9 239 aaKnown RBP4.82□□□□□ -1.64
C11orf88-204ENST00000529661 CXorf56Q9H5V9 222 aa4.82□□□□□ -1.64
C11orf88-204ENST00000529661 ENTPD7Q9NQZ7 604 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms