RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 KLHL32Q96NJ5 620 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 ZNF599Q96NL3 588 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 SNRNP25Q9BV90 132 aaKnown RBP9.73□□□□□ -0.85
CHD7-208ENST00000528280 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 SLC39A8Q9C0K1 460 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 TSPY26PQ9H489 355 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 EVA1BQ9NVM1 165 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 HAUS2Q9NVX0 235 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 UVRAGQ9P2Y5 699 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 IPO11Q9UI26 975 aaKnown RBP9.73□□□□□ -0.85
CHD7-208ENST00000528280 FREM2Q5SZK8 3169 aa9.73□□□□□ -0.85
CHD7-208ENST00000528280 A0A087X0T9 212 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 CFAP69A5D8W1 941 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 TMEM110-MUSTN1A8MSY1 372 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 ATMINO43313 823 aaPredicted RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 TM7SF2O76062 418 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 CAPNS1P04632 268 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 H2AFZP0C0S5 128 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 FAM228BP0C875 321 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 ALPPL2P10696 532 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 EPHA8P29322 1005 aaPredicted RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 CASP14P31944 242 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 SERPINB6P35237 376 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 HSPA9P38646 679 aaKnown RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 HNRNPKP61978 463 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHD7-208ENST00000528280 YPEL5P62699 121 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 DPYSL2Q16555 572 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 PRAMEF14Q5SWL7 426 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 AFMIDQ63HM1 303 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 E4F1Q66K89 784 aaPredicted RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 ERAP2Q6P179 960 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 BRAT1Q6PJG6 821 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 C19orf48Q6RUI8 117 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 TMCO3Q6UWJ1 677 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 LAYNQ6UX15 382 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 LEKR1Q6ZMV7 388 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 Q6ZSR6 202 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 H2AFVQ71UI9 128 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 PARS2Q7L3T8 475 aaKnown RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 TMPRSS7Q7RTY8 843 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 SLCO6A1Q86UG4 719 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 SPATS2Q86XZ4 545 aaKnown RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 MAP7D3Q8IWC1 876 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 ARFGAP1Q8N6T3 406 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 CXorf40AQ8TE69 158 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 BTN2A2Q8WVV5 523 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 KLK6Q92876 244 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 BBC3Q96PG8 261 aaPredicted RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 NUP85Q9BW27 656 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 XPO4Q9C0E2 1151 aaKnown RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 THAP2Q9H0W7 228 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 ATP13A3Q9H7F0 1226 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 SP110Q9HB58 689 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 CWC15Q9P013 229 aaKnown RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 RCOR3Q9P2K3 495 aaPredicted RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 ANAPC7Q9UJX3 599 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 ZFR2Q9UPR6 939 aaKnown RBP9.72□□□□□ -0.85
CHD7-208ENST00000528280 CHD5Q8TDI0 1954 aa9.72□□□□□ -0.85
CHD7-208ENST00000528280 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 SSU72P8A0A1W2PR75 194 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 IGLON5A6NGN9 336 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 H3BM21 787 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 J3KR12 359 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 DFFAO00273 331 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 ENC1O14682 589 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 AREL1O15033 823 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 DKK1O94907 266 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 GYPCP04921 128 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 ATXN1LP0C7T5 689 aaKnown RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 TIMP2P16035 220 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 PRLRP16471 622 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 CKMT2P17540 419 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 SERPINA4P29622 427 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 PEX5P50542 639 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 E2F1Q01094 437 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 IL9RQ01113 521 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 BCL2L1Q07817 233 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 BNIP3Q12983 259 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 ZNF211Q13398 564 aaPredicted RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 DPYSQ14117 519 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 SHBQ15464 509 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 SLC18A3Q16572 532 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 CA9Q16790 459 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 UGP2Q16851 508 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 TMEM52BQ4KMG9 183 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 RALGPS1Q5JS13 557 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 ATXN7L2Q5T6C5 722 aaPredicted RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 SEL1L3Q68CR1 1132 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 KYAT3Q6YP21 454 aaKnown RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 CCNI2Q6ZMN8 369 aaPredicted RBP9.71□□□□□ -0.86
CHD7-208ENST00000528280 POLNQ7Z5Q5 900 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 SRLQ86TD4 932 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 TMPRSS12Q86WS5 348 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 PROSER1Q86XN7 944 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 EID2Q8N6I1 236 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 PAF1Q8N7H5 531 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 OR6K2Q8NGY2 324 aa9.71□□□□□ -0.86
CHD7-208ENST00000528280 CTNNBL1Q8WYA6 563 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms