RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 BRDTQ58F21 947 aaPredicted RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 KCNT1Q5JUK3 1230 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 C6orf10Q5SRN2 563 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 B3GNTL1Q67FW5 361 aaPredicted RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 OR7E24Q6IFN5 339 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 DCLRE1AQ6PJP8 1040 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 LRRC74BQ6ZQY2 392 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 IKBIPQ70UQ0 350 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 GRASPQ7Z6J2 395 aaPredicted RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 DPP9Q86TI2 863 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ADSSL1Q8N142 457 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 TMEM132CQ8N3T6 1108 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 CCNYL1Q8N7R7 359 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MINDY2Q8NBR6 621 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ATAD1Q8NBU5 361 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 KCNH5Q8NCM2 988 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ZSWIM2Q8NEG5 633 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ENGASEQ8NFI3 743 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 LHFPL5Q8TAF8 219 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 FANK1Q8TC84 345 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 SEPT1Q8WYJ6 367 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 TRIM63Q969Q1 353 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 NMD3Q96D46 503 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 DNAJC1Q96KC8 554 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM167AQ96KS9 214 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC43Q96MW1 224 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 TSNARE1Q96NA8 513 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MED15Q96RN5 788 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MMS19Q96T76 1030 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 SDF4Q9BRK5 362 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ALOXE3Q9BYJ1 711 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 RHOBTB2Q9BYZ6 727 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ANKRD2Q9GZV1 360 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MTFR1LQ9H019 292 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 INTS2Q9H0H0 1204 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 KCTD10Q9H3F6 313 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 RNF41Q9H4P4 317 aaPredicted RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 TLE6Q9H808 572 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ZMAT4Q9H898 229 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 NTN4Q9HB63 628 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 LZTFL1Q9NQ48 299 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MAN1C1Q9NR34 630 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 FANCLQ9NW38 375 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 MRPL39Q9NYK5 338 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF69Q9UC07 566 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 DNAJB4Q9UDY4 337 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 DNAJC12Q9UKB3 198 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 RCOR1Q9UKL0 485 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 B3GNT3Q9Y2A9 372 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 STK38LQ9Y2H1 464 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 UTP11Q9Y3A2 253 aaKnown RBP3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 PCDHGA8Q9Y5G5 932 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 PCDHGA3Q9Y5H0 932 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 CACNG2Q9Y698 323 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 STON1Q9Y6Q2 735 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 ADGRB3O60242 1522 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 PZPP20742 1482 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 NEO1Q92859 1461 aa3.79□□□□□ -1.8
CLNS1A-209ENST00000527299 CD109Q6YHK3 1445 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 LRRIQ1Q96JM4 1722 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 IFT172Q9UG01 1749 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 MROH7-TTC4A0A0A0MT08 1334 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 PNMA6EA0A0J9YXQ4 647 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 WDR91A4D1P6 747 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SMCO2A6NFE2 343 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 PI4K2BG5E9Z4 385 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 STX16-NPEPL1H3BU86 382 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 E2F3O00716 465 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 NRP2O60462 931 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SNX3O60493 162 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 RANBP6O60518 1105 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 DKC1O60832 514 aaKnown RBP eCLIP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 EYA4O95677 639 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 NPPAP01160 153 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT7P08729 469 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 FAM228BP0C875 321 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SRGNP10124 158 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 HPGDP15428 266 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 CYP3A5P20815 502 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 GSTM2P28161 218 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 HOXA6P31267 233 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 RCVRNP35243 200 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 IGHMBP2P38935 993 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 AP2S1P53680 142 aaPredicted RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 STX1BP61266 288 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 IFITM2Q01629 132 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TFAP4Q01664 338 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 MYL5Q02045 173 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT17Q04695 432 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 RAD51Q06609 339 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF33BQ06732 778 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 AIMP1Q12904 312 aaKnown RBP3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 COASYQ13057 564 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ACVR2BQ13705 512 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 GIT2Q14161 759 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ALX1Q15699 326 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 TXNRD1Q16881 649 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 SMU1Q2TAY7 513 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 EDRF1Q3B7T1 1238 aa3.78□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF829Q3KNS6 432 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms