RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 BUB1O43683 1085 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 CNTN5O94779 1100 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 APOEP02649 317 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 RARAP10276 462 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 L1CAMP32004 1257 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 MAN1A1P33908 653 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 SLC11A2P49281 568 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 FOXK1P85037 733 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 SFSWAPQ12872 951 aaKnown RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 MESDQ14696 234 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 ISXQ2M1V0 245 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 ALFQ53S48 1182 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 C3orf38Q5JPI3 329 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 ERMARDQ5T6L9 678 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 SCYL2Q6P3W7 929 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 NCEH1Q6PIU2 408 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 KIAA0907Q7Z7F0 614 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 IQCHQ86VS3 1027 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 LGI2Q8N0V4 545 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 CFAP52Q8N1V2 620 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 MFSD2AQ8NA29 543 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 OR2T34Q8NGX1 318 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 EXTL1Q92935 676 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 TMA16Q96EY4 203 aaKnown RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 PRR11Q96HE9 360 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 KCTD15Q96SI1 283 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 SNRNP25Q9BV90 132 aaKnown RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 KLC2Q9H0B6 622 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 RSPH9Q9H1X1 276 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 PABPC3Q9H361 631 aaKnown RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 PPP2R2CQ9Y2T4 447 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 CELSR2Q9HCU4 2923 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 RP1L1Q8IWN7 2480 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 A0A1B0GVM2 712 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 C3orf70A6NLC5 250 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 LRIG2O94898 1065 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 FAM87AP0C7U9 286 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 COMTP21964 271 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 DUSP3P51452 185 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 OVGP1Q12889 678 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 FNDC3BQ53EP0 1204 aaKnown RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 FSCBQ5H9T9 825 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 MPP7Q5T2T1 576 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 USP53Q70EK8 1073 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 SND1Q7KZF4 910 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 CIR1Q86X95 450 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 SPATS2Q86XZ4 545 aaKnown RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 WFIKKN2Q8TEU8 576 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 RNF34Q969K3 372 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 ALG14Q96F25 216 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 SERAC1Q96JX3 654 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 SLC25A18Q9H1K4 315 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 USP29Q9HBJ7 922 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 NDFIP2Q9NV92 336 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 MPP6Q9NZW5 540 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 INTS6Q9UL03 887 aaKnown RBP11.13□□□□□ -0.63
NEDD8-204ENST00000526430 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 FZD4Q9ULV1 537 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 PLA2G4CQ9UP65 541 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 CAPN6Q9Y6Q1 641 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 CHD5Q8TDI0 1954 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 POLQO75417 2590 aa11.13□□□□□ -0.63
NEDD8-204ENST00000526430 BLACEA4D250 179 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 FAM47DPA6NHR8 397 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 TMEM110-MUSTN1A8MSY1 372 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 LATO43561 262 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 MAGEC1O60732 1142 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 TBL1XO60907 577 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 RNF8O76064 485 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 MOCS3O95396 460 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 CYBBP04839 570 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 CD48P09326 243 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 HLA-FP30511 346 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 MARCKSL1P49006 195 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 PEX5P50542 639 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 AIF1P55008 147 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 DPYSL2Q16555 572 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 MPPE1Q53F39 396 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 BOLA3Q53S33 107 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 HS1BP3Q53T59 392 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 CXorf57Q6NSI4 855 aaKnown RBP11.12□□□□□ -0.63
NEDD8-204ENST00000526430 SLC25A45Q8N413 288 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 ARL14Q8N4G2 192 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 ZNF366Q8N895 744 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 FIBINQ8TAL6 211 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 TEKT4Q8WW24 435 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 RAPGEF5Q92565 580 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-204ENST00000526430 NOL6Q9H6R4 1146 aaKnown RBP11.12□□□□□ -0.63
NEDD8-204ENST00000526430 ZWILCHQ9H900 591 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 GEMIN8Q9NWZ8 242 aaKnown RBP11.12□□□□□ -0.63
NEDD8-204ENST00000526430 FBXL12Q9NXK8 326 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms