RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CLCN5P51795 746 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 TAS2R38P59533 333 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 SULT2A1Q06520 285 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 XRCC4Q13426 336 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 BYSLQ13895 437 aaKnown RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 HNRNPDQ14103 355 aaKnown RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 CCNG2Q16589 344 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 FBXO43Q4G163 708 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 INO80DQ53TQ3 878 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 ANKRD20A2Q5SQ80 823 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ANKRD20A1Q5TYW2 823 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 MARC1Q5VT66 337 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ANKRD20A3Q5VUR7 823 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ANKRD22Q5VYY1 191 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ALG1LQ6GMV1 187 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ANO7Q6IWH7 933 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 RETSATQ6NUM9 610 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 RFLNAQ6ZTI6 216 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PARS2Q7L3T8 475 aaKnown RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 SYT13Q7L8C5 426 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PID1Q7Z2X4 250 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 CCDC117Q8IWD4 279 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 SPEM1Q8N4L4 309 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 DEFB119Q8N690 84 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PCDH20Q8N6Y1 951 aaKnown RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 C12orf50Q8NA57 414 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 SPATA4Q8NEY3 305 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 OR2AP1Q8NGE2 309 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PIP4K2CQ8TBX8 421 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 UCMAQ8WVF2 138 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 HMGB4Q8WW32 186 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 FATE1Q969F0 183 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ISG20Q96AZ6 181 aaKnown RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 RTP4Q96DX8 246 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 TEKT5Q96M29 485 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PWWP2AQ96N64 755 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 ZNF599Q96NL3 588 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PSKH2Q96QS6 385 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 NELL2Q99435 816 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 KRT12Q99456 494 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 SEMA3CQ99985 751 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 APOL2Q9BQE5 337 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 CINPQ9BW66 212 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 CARD6Q9BX69 1037 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 RSPH9Q9H1X1 276 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 ZDHHC6Q9H6R6 413 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PRDM16Q9HAZ2 1276 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PRMT8Q9NR22 394 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 PIH1D1Q9NWS0 290 aaKnown RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 SEPT3Q9UH03 358 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 AMACRQ9UHK6 382 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 MBD1Q9UIS9 605 aaPredicted RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 CDC23Q9UJX2 597 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PPM1HQ9ULR3 514 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 HPCAL4Q9UM19 191 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 PLA2G4CQ9UP65 541 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 MRPS17Q9Y2R5 130 aaKnown RBP6.56□□□□□ -1.36
CD44-214ENST00000525211 TTLL3Q9Y4R7 772 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 SLCO1B1Q9Y6L6 691 aa6.56□□□□□ -1.36
CD44-214ENST00000525211 EML5Q05BV3 1969 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 A0A1W2PP55 124 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 TARSL2A2RTX5 802 aaKnown RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 C5orf60A6NFR6 353 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 A8MX80 341 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 C10orf142B7Z368 130 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 PPP1R12AO14974 1030 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 TTI1O43156 1089 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 HTRA2O43464 458 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 RAD51CO43502 376 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 PHF2O75151 1096 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 USP12O75317 370 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 GSRP00390 522 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 AGTP01019 485 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 IFNB1P01574 187 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 UGT2B4P06133 528 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 PIRTP0C851 137 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 GM2AP17900 193 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 SLC8A1P32418 973 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 ADRA1AP35348 466 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 CETN2P41208 172 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 CD86P42081 329 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 ST8SIA6P61647 398 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 SLC7A5Q01650 507 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 CSTF1Q05048 431 aaKnown RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 SLC20A2Q08357 652 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 ITKQ08881 620 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 CNTN1Q12860 1018 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 MSLNQ13421 630 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 MTM1Q13496 603 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 FGL2Q14314 439 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 LRRC32Q14392 662 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 ZNF235Q14590 738 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 RFTN1Q14699 578 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 CST6Q15828 149 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 EOGTQ5NDL2 527 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 KCTD11Q693B1 232 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 DENND5AQ6IQ26 1287 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 DRICH1Q6PGQ1 229 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 KIAA1324Q6UXG2 1013 aaKnown RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 ZNF572Q7Z3I7 529 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms