RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 KANSL1Q7Z3B3 1105 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 NUP85Q9BW27 656 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 CPEB1Q9BZB8 566 aaKnown RBP18.78■□□□□ 0.6
CAPN1-203ENST00000525013 SP110Q9HB58 689 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 DNAJC28Q9NX36 388 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 IPO11Q9UI26 975 aaKnown RBP18.78■□□□□ 0.6
CAPN1-203ENST00000525013 ANAPC7Q9UJX3 599 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.78■□□□□ 0.6
CAPN1-203ENST00000525013 SHROOM3Q8TF72 1996 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 LRRK1Q38SD2 2015 aa18.78■□□□□ 0.6
CAPN1-203ENST00000525013 DMXL2Q8TDJ6 3036 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 ZZEF1O43149 2961 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 AREL1O15033 823 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 SPINT1O43278 529 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 MMP20O60882 483 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 TCF4P15884 667 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 TIMP2P16035 220 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 ITIH2P19823 946 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 ARL4AP40617 200 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 ZNF542PQ5EBM4 170 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 CFAP58Q5T655 872 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 ALKBH5Q6P6C2 394 aaKnown RBP18.77■□□□□ 0.6
CAPN1-203ENST00000525013 KYAT3Q6YP21 454 aaKnown RBP18.77■□□□□ 0.6
CAPN1-203ENST00000525013 TMPRSS7Q7RTY8 843 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 MARCH9Q86YJ5 346 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 DCP2Q8IU60 420 aaKnown RBP18.77■□□□□ 0.6
CAPN1-203ENST00000525013 ARHGAP12Q8IWW6 846 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 SLC22A18ASQ8N1D0 253 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 GALNT15Q8N3T1 639 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 NPWQ8N729 165 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 CXorf40AQ8TE69 158 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 BTBD6Q96KE9 485 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 WRAP53Q9BUR4 548 aaKnown RBP18.77■□□□□ 0.6
CAPN1-203ENST00000525013 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.77■□□□□ 0.6
CAPN1-203ENST00000525013 DKK3Q9UBP4 350 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 IP6K2Q9UHH9 426 aa18.77■□□□□ 0.6
CAPN1-203ENST00000525013 FAM149AA5PLN7 773 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 FFAR2O15552 330 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 CYP1A2P05177 515 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 DGKAP23743 735 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 SSR1P43307 286 aaKnown RBP18.76■□□□□ 0.59
CAPN1-203ENST00000525013 RABIFP47224 123 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 DPYSQ14117 519 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 GRM3Q14832 879 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 HS1BP3Q53T59 392 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 AFMIDQ63HM1 303 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 ARHGAP36Q6ZRI8 547 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 SLC25A45Q8N413 288 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 LZTR1Q8N653 840 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 PAF1Q8N7H5 531 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 TSEN2Q8NCE0 465 aaKnown RBP18.76■□□□□ 0.59
CAPN1-203ENST00000525013 LENG8Q96PV6 779 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-203ENST00000525013 KLF6Q99612 283 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-203ENST00000525013 CINPQ9BW66 212 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-203ENST00000525013 SUV39H2Q9H5I1 410 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 CAAP1Q9H8G2 361 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 UCKL1Q9NWZ5 548 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 PCDHGA1Q9Y5H4 931 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 CHD6Q8TD26 2715 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 ASPMQ8IZT6 3477 aa18.76■□□□□ 0.59
CAPN1-203ENST00000525013 APC2O95996 2303 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 MYO1FO00160 1098 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 CBFA2T2O43439 604 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 SIGLEC6O43699 453 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 RFPL3O75679 317 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 TM7SF2O76062 418 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 RARAP10276 462 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 AMPD1P23109 780 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
CAPN1-203ENST00000525013 DPYSL2Q16555 572 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 SRLQ86TD4 932 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 CAMK1DQ8IU85 385 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 ASB12Q8WXK4 309 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 C1QTNF7Q9BXJ2 289 aa18.75■□□□□ 0.59
CAPN1-203ENST00000525013 MYLKQ15746 1914 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 PKD1L2Q7Z442 2459 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 TRIM38O00635 465 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 BUB1BO60566 1050 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-203ENST00000525013 PIAS2O75928 621 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 C1SP09871 688 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 CKMT2P17540 419 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 RGRP47804 291 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 ACADVLP49748 655 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 SUOXP51687 545 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 IL10RBQ08334 325 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 ELP6Q0PNE2 266 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 ZNF211Q13398 564 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-203ENST00000525013 PDE1CQ14123 709 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-203ENST00000525013 FZD2Q14332 565 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 SMAD1Q15797 465 aaKnown RBP18.74■□□□□ 0.59
CAPN1-203ENST00000525013 TXNRD3NBQ6F5E7 133 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 TMCO3Q6UWJ1 677 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 KDM7AQ6ZMT4 941 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 POLNQ7Z5Q5 900 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 TP53INP2Q8IXH6 220 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 NIPA2Q8N8Q9 360 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 DENND6BQ8NEG7 585 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 HCAR2Q8TDS4 363 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 IFT43Q96FT9 208 aa18.74■□□□□ 0.59
CAPN1-203ENST00000525013 ZNF641Q96N77 438 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms