RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 LRRK1Q38SD2 2015 aa21.14■□□□□ 0.97
TRAPPC9-215ENST00000524162 A0A1W2PQ67 120 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 TLR4O00206 839 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 WNT1P04628 370 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 ADRB1P08588 477 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 CD48P09326 243 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 KDELR1P24390 212 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 GKP32189 559 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 ELP6Q0PNE2 266 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 GALNT2Q10471 571 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 SUZ12Q15022 739 aaKnown RBP21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 ATP13A4Q4VNC1 1196 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 SRLQ86TD4 932 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 ATPAF2Q8N5M1 289 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 DENND6BQ8NEG7 585 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 NSMCE1Q8WV22 266 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 ECHDC3Q96DC8 303 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 TSGA13Q96PP4 275 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 SLC17A9Q9BYT1 436 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 ATP13A3Q9H7F0 1226 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 GDF3Q9NR23 364 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 PCDHA13Q9Y5I0 950 aa21.13■□□□□ 0.97
TRAPPC9-215ENST00000524162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 FLRT2O43155 660 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 NDUFA10O95299 355 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 CR2P20023 1033 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 MX2P20592 715 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 SERPINA4P29622 427 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 MAT2AP31153 395 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 AKT2P31751 481 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 GARSP41250 739 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 ABL2P42684 1182 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 RXRGP48443 463 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 NOVA1P51513 510 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 NXPH1P58417 271 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 SLC10A7Q0GE19 358 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 MMRN1Q13201 1228 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 NCBP2-AS2Q69YL0 99 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 ARHGAP36Q6ZRI8 547 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 TTC7BQ86TV6 843 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 CPNE8Q86YQ8 564 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 DCP2Q8IU60 420 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 TP53INP2Q8IXH6 220 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 RHOT1Q8IXI2 618 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 TEX26Q8N6G2 289 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 OR2I1PQ8NGU4 316 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 RNF157Q96PX1 679 aa21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 ELF4Q99607 663 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 DDX56Q9NY93 547 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 FNDC3AQ9Y2H6 1198 aaKnown RBP21.12■□□□□ 0.97
TRAPPC9-215ENST00000524162 COL5A1P20908 1838 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 ACACBO00763 2458 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 A0A1B0GTQ1 180 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 CFAP69A5D8W1 941 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 WNT9AO14904 365 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 SPINT1O43278 529 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 IPO7O95373 1038 aaKnown RBP21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 TIMP2P16035 220 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 CCT8P50990 548 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 POLR2LP62875 67 aaKnown RBP21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 UGP2Q16851 508 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 TIGD7Q6NT04 549 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 PSAPL1Q6NUJ1 521 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 ABI3BPQ7Z7G0 1075 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 IFT43Q96FT9 208 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 EXOC2Q96KP1 924 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 MGME1Q9BQP7 344 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 HAUS2Q9NVX0 235 aa21.11■□□□□ 0.97
TRAPPC9-215ENST00000524162 MED19A0JLT2 244 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 C3orf70A6NLC5 250 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 BTNL10A8MVZ5 291 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 TOR1BO14657 336 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 INSIG1O15503 277 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 SOCS5O75159 536 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 CES1P23141 567 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 CCNCP24863 283 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 RGRP47804 291 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 ARRB1P49407 418 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 ZNF235Q14590 738 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 AGERQ15109 404 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 IFI16Q16666 785 aaKnown RBP21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 TMEM52BQ4KMG9 183 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 MARC1Q5VT66 337 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 SEL1L3Q68CR1 1132 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 ALG1LQ6GMV1 187 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 GLRX5Q86SX6 157 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 NAXDQ8IW45 347 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 PQLC3Q8N755 202 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 RAPGEF5Q92565 580 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 MAML1Q92585 1016 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 NUDCD1Q96RS6 583 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 IL21RQ9HBE5 538 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 GPR27Q9NS67 375 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 CHD8Q9HCK8 2581 aa21.1■□□□□ 0.97
TRAPPC9-215ENST00000524162 GOLGA4Q13439 2230 aaKnown RBP21.09■□□□□ 0.97
TRAPPC9-215ENST00000524162 H0Y8X5 98 aa21.09■□□□□ 0.97
TRAPPC9-215ENST00000524162 NEMP1O14524 444 aa21.09■□□□□ 0.97
TRAPPC9-215ENST00000524162 TRAFD1O14545 582 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC9-215ENST00000524162 MUSKO15146 869 aa21.09■□□□□ 0.97
TRAPPC9-215ENST00000524162 SLC31A1O15431 190 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms