RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	SSX2IP	Q9Y2D8	614 aa		10.88	□□□□□ -0.67
SPIDR-222	ENST00000524006	TRANK1	O15050	2925 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	TMEM265	A0A087WTH1	108 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006		A0A1B0GVM2	712 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	HMX2	A2RU54	273 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	TCAF2	A6NFQ2	919 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	GOLGA8T	H3BQL2	631 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	FCHO1	O14526	889 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	PFDN6	O15212	129 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	TIMP1	P01033	207 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ESRRA	P11474	423 aa	Predicted RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	COL6A2	P12110	1019 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	DNAJB1	P25685	340 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	SERPINB3	P29508	390 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC8A1	P32418	973 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ADRA1A	P35348	466 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	AVPR1A	P37288	418 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC1A2	P43004	574 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	MAGEA12	P43365	314 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	CHRNA4	P43681	627 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	KCNQ1	P51787	676 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	RAB10	P61026	200 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ABCE1	P61221	599 aa	Known RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	MPP1	Q00013	466 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	DSG1	Q02413	1049 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC10A7	Q0GE19	358 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	GRM3	Q14832	879 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	GPNMB	Q14956	572 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	PCLAF	Q15004	111 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	TCTN1	Q2MV58	587 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	TSTD2	Q5T7W7	516 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	MBLAC2	Q68D91	279 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	NEPRO	Q6NW34	567 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZCCHC23	Q6ZST2	131 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	CHST9	Q7L1S5	443 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	C16orf59	Q7L2K0	433 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	CLNK	Q7Z7G1	428 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZC3HC1	Q86WB0	502 aa	Known RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC41A1	Q8IVJ1	513 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	LMNTD2	Q8IXW0	634 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	CFAP52	Q8N1V2	620 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	HJURP	Q8NCD3	748 aa	Predicted RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	OR6P1	Q8NGX9	317 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZNF461	Q8TAF7	563 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	TRMT2B	Q96GJ1	504 aa	Known RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	NOL6	Q9H6R4	1146 aa	Known RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	CWH43	Q9H720	699 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	CAB39L	Q9H9S4	337 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	SCUBE2	Q9NQ36	999 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	MRPL17	Q9NRX2	175 aa	Known RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	HAO1	Q9UJM8	370 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	MAFF	Q9ULX9	164 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	APOBEC2	Q9Y235	224 aa	Known RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	DNAJC16	Q9Y2G8	782 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ACOT9	Q9Y305	439 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	PCDHB12	Q9Y5F1	795 aa		10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.87	□□□□□ -0.67
SPIDR-222	ENST00000524006	NCOR1	O75376	2440 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZNF840P	A6NDX5	716 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	ADAM12	O43184	909 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	COCH	O43405	550 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	PAPSS2	O95340	614 aa	Predicted RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	VNN2	O95498	520 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	CRTAM	O95727	393 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	C2	P06681	752 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	HOXB8	P17481	243 aa	Predicted RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	HNRNPH1	P31943	449 aa	Known RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	MNAT1	P51948	309 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	HK2	P52789	917 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	AQP5	P55064	265 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	ELF3	P78545	371 aa	Predicted RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	POU4F1	Q01851	419 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	OCRL	Q01968	901 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	TWF1	Q12792	350 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	ITGA9	Q13797	1035 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	RCN2	Q14257	317 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	RFTN1	Q14699	578 aa	Predicted RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC14A2	Q15849	920 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	PABPC1L	Q4VXU2	614 aa	Known RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	PPM1J	Q5JR12	505 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	SIRPB2	Q5JXA9	342 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	C6orf163	Q5TEZ5	329 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	NADSYN1	Q6IA69	706 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	MRNIP	Q6NTE8	343 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	ESRP1	Q6NXG1	681 aa	Known RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	RFWD3	Q6PCD5	774 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	RANBP10	Q6VN20	620 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	SETD3	Q86TU7	594 aa	Predicted RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	C10orf107	Q8IVU9	208 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	CNTN4	Q8IWV2	1026 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC39A11	Q8N1S5	342 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	KIF2B	Q8N4N8	673 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	TMEM199	Q8N511	208 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	TEX26	Q8N6G2	289 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	TTC16	Q8NEE8	873 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	PIWIL2	Q8TC59	973 aa	Known RBP	10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	BLOC1S5	Q8TDH9	187 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	AZIN2	Q96A70	460 aa		10.86	□□□□□ -0.67
SPIDR-222	ENST00000524006	SKA1	Q96BD8	255 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms