RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 SLC17A9Q9BYT1 436 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 SLC32A1Q9H598 525 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 TM7SF3Q9NS93 570 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 KLHL11Q9NVR0 708 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 PCDHGB2Q9Y5G2 931 aa16.58■□□□□ 0.24
PABPC1-221ENST00000522720 EPN1Q9Y6I3 576 aaPredicted RBP16.58■□□□□ 0.24
PABPC1-221ENST00000522720 ANKRD36A6QL64 1941 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 GOLGA6L3A6NEY3 463 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 H0Y8X5 98 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 NEMP1O14524 444 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 GIPC1O14908 333 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 MUSKO15146 869 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 SPINT1O43278 529 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 BUB1BO60566 1050 aaPredicted RBP16.57■□□□□ 0.24
PABPC1-221ENST00000522720 PIGNO95427 931 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 KCNA4P22459 653 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 HNRNPA2B1P22626 353 aaKnown RBP16.57■□□□□ 0.24
PABPC1-221ENST00000522720 AKT2P31751 481 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 RENBPP51606 427 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 SUOXP51687 545 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 ZFYVE27Q5T4F4 411 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 NCBP2-AS2Q69YL0 99 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 DBX2Q6ZNG2 339 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 ATPAF2Q8N5M1 289 aa16.57■□□□□ 0.24
PABPC1-221ENST00000522720 LUC7LQ9NQ29 371 aaKnown RBP16.57■□□□□ 0.24
PABPC1-221ENST00000522720 A0A0A6YYK5 440 aaPredicted RBP16.56■□□□□ 0.24
PABPC1-221ENST00000522720 TSPAN11A1L157 253 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 SOWAHDA6NJG2 315 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 ZNF487B1APH4 448 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 SH3BP5O60239 455 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 MAGEC1O60732 1142 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 NDUFA10O95299 355 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 PAK4O96013 591 aaPredicted RBP16.56■□□□□ 0.24
PABPC1-221ENST00000522720 ADRB1P08588 477 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 HSPA9P38646 679 aaKnown RBP16.56■□□□□ 0.24
PABPC1-221ENST00000522720 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
PABPC1-221ENST00000522720 NXPH1P58417 271 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 GALNT2Q10471 571 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 FGL2Q14314 439 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 N4BP2L1Q5TBK1 243 aaPredicted RBP16.56■□□□□ 0.24
PABPC1-221ENST00000522720 VSIG1Q86XK7 387 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 CAMK1DQ8IU85 385 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 PQLC3Q8N755 202 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 NSMCE1Q8WV22 266 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 ASB12Q8WXK4 309 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 ELF4Q99607 663 aaPredicted RBP16.56■□□□□ 0.24
PABPC1-221ENST00000522720 C1QTNF2Q9BXJ5 285 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 ATP13A3Q9H7F0 1226 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 GDF3Q9NR23 364 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 ITM2BQ9Y287 266 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 CA5BQ9Y2D0 317 aa16.56■□□□□ 0.24
PABPC1-221ENST00000522720 LRRD1A4D1F6 860 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 IGLON5A6NGN9 336 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
PABPC1-221ENST00000522720 MFSD11O43934 449 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 ITIH2P19823 946 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 COMTP21964 271 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 SERPINA4P29622 427 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 CDC25BP30305 580 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 GARSP41250 739 aaKnown RBP16.55■□□□□ 0.24
PABPC1-221ENST00000522720 SCNN1BP51168 640 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 AP1S1P61966 158 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 SGCGQ13326 291 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 HNRNPDQ14103 355 aaKnown RBP16.55■□□□□ 0.24
PABPC1-221ENST00000522720 ZNF235Q14590 738 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 SUZ12Q15022 739 aaKnown RBP16.55■□□□□ 0.24
PABPC1-221ENST00000522720 UGP2Q16851 508 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 MARC1Q5VT66 337 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 BRAT1Q6PJG6 821 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 SPATS2Q86XZ4 545 aaKnown RBP16.55■□□□□ 0.24
PABPC1-221ENST00000522720 RHOT1Q8IXI2 618 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 BBS5Q8N3I7 341 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 KLHDC7BQ96G42 594 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 TSGA13Q96PP4 275 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 LENG8Q96PV6 779 aaPredicted RBP16.55■□□□□ 0.24
PABPC1-221ENST00000522720 MYOCQ99972 504 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 ERVMER34-1Q9H9K5 563 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 FZD3Q9NPG1 666 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 IMPACTQ9P2X3 320 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 GGT7Q9UJ14 662 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 TFR2Q9UP52 801 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 HYOU1Q9Y4L1 999 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 HS3ST3A1Q9Y663 406 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 ALG6Q9Y672 507 aa16.55■□□□□ 0.24
PABPC1-221ENST00000522720 A0A1B0GTQ1 180 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 PCDHGA12O60330 932 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
PABPC1-221ENST00000522720 CR2P20023 1033 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 MX2P20592 715 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 XPAP23025 273 aaPredicted RBP16.54■□□□□ 0.24
PABPC1-221ENST00000522720 CCT8P50990 548 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 GBE1Q04446 702 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 BCL2L1Q07817 233 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 ELP6Q0PNE2 266 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 IFI16Q16666 785 aaKnown RBP16.54■□□□□ 0.24
PABPC1-221ENST00000522720 LRRC73Q5JTD7 316 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 PRAMEF14Q5SWL7 426 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 CFAP58Q5T655 872 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 RAD9BQ6WBX8 426 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms