RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 RNF40O75150 1001 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 SUN1O94901 812 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 KLF8O95600 359 aaPredicted RBP13.52□□□□□ -0.25
CLK4-210ENST00000522136 POP4O95707 220 aaKnown RBP13.52□□□□□ -0.25
CLK4-210ENST00000522136 PRLP01236 227 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 CTSLP07711 333 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 GOLGA6DP0CG33 693 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 TPH1P17752 444 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 CES1P23141 567 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 CDK16Q00536 496 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 CAV1Q03135 178 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 ENPP2Q13822 863 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 CCINQ13939 588 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 DENND5AQ6IQ26 1287 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 RANBP10Q6VN20 620 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 PPP1R21Q6ZMI0 780 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 CCDC25Q86WR0 208 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 PLPP6Q8IY26 295 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 SIX5Q8N196 739 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 IL17RCQ8NAC3 791 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 MCUQ8NE86 351 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 MSANTD3Q96H12 275 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 SERPINB12Q96P63 405 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 FMO2Q99518 471 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 POLR3BQ9NW08 1133 aaPredicted RBP13.52□□□□□ -0.25
CLK4-210ENST00000522136 GOLGA6AQ9NYA3 693 aa13.52□□□□□ -0.25
CLK4-210ENST00000522136 LOC285095A0A1B0GVY8 99 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 SESN2P58004 480 aaPredicted RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 PRKCQQ04759 706 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 CDK18Q07002 472 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 BCL2L1Q07817 233 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 GALNT3Q14435 633 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 PTPRRQ15256 657 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 POM121L1PQ3SYA9 428 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 DENND2CQ68D51 928 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 NAPEPLDQ6IQ20 393 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 AGGF1Q8N302 714 aaeCLIP13.51□□□□□ -0.25
CLK4-210ENST00000522136 ZCCHC9Q8N567 271 aaKnown RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 IFT43Q96FT9 208 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 PPP1R2P1Q96PQ5 205 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 SMIM14Q96QK8 99 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 TRIB3Q96RU7 358 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 FAM129BQ96TA1 746 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 HEPHQ9BQS7 1158 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 TDRD1Q9BXT4 1180 aaKnown RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 PRSS16Q9NQE7 514 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 WASF2Q9Y6W5 498 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 CKAP5Q14008 2032 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 TRAFD1O14545 582 aaPredicted RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 ADAM23O75077 832 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 LEFTY1O75610 366 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 UGT2B4P06133 528 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 TARSP26639 723 aaKnown RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 NTSR1P30989 418 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 CRADDP78560 199 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 RALGPS1Q5JS13 557 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 PKN3Q6P5Z2 889 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 ZNF687Q8N1G0 1237 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 MPP5Q8N3R9 675 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 DNAAF3Q8N9W5 541 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 TXNDC5Q8NBS9 432 aaKnown RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 CPEB1Q9BZB8 566 aaKnown RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 FOXQ1Q9C009 403 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 ATP13A3Q9H7F0 1226 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 CASS4Q9NQ75 786 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 MTRF1LQ9UGC7 380 aaKnown RBP13.51□□□□□ -0.25
CLK4-210ENST00000522136 SUN2Q9UH99 717 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 IL36AQ9UHA7 158 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 SARDHQ9UL12 918 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 PCDHB9Q9Y5E1 797 aa13.51□□□□□ -0.25
CLK4-210ENST00000522136 TRIOO75962 3097 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 MYLKQ15746 1914 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.5□□□□□ -0.25
CLK4-210ENST00000522136 NDC80O14777 642 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 ATXN1LP0C7T5 689 aaKnown RBP13.5□□□□□ -0.25
CLK4-210ENST00000522136 CHRNB1P11230 501 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 MCM3P25205 808 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 SLC8A1P32418 973 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 MAPK8P45983 427 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 METAP1P53582 386 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 ARL4CP56559 192 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 STARD6P59095 220 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 SARNPP82979 210 aaKnown RBP13.5□□□□□ -0.25
CLK4-210ENST00000522136 RAD51Q06609 339 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 UBXN2BQ14CS0 331 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 FASTKD3Q14CZ7 662 aaKnown RBP13.5□□□□□ -0.25
CLK4-210ENST00000522136 SLC1A5Q15758 541 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 SLC14A2Q15849 920 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 HIF1AQ16665 826 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 CERCAMQ5T4B2 595 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 KIAA1211LQ6NV74 962 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 Q6ZS52 159 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 LINC00523Q86TU6 105 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 ZSWIM9Q86XI8 627 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
CLK4-210ENST00000522136 EIF1ADQ8N9N8 165 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms