RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SKIV2L2P42285 1042 aaKnown RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 OCRLQ01968 901 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 CDK18Q07002 472 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 GPR17Q13304 367 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 IKBKEQ14164 716 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 RABGAP1LQ5R372 815 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 RBM20Q5T481 1227 aaKnown RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 RSPO2Q6UXX9 243 aaPredicted RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 ZC3HC1Q86WB0 502 aaKnown RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 MYLK4Q86YV6 388 aaPredicted RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 TREML1Q86YW5 311 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
CLK4-206ENST00000520878 RBM15BQ8NDT2 890 aaKnown RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 SLC7A6OSQ96CW6 309 aaPredicted RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 UBA2Q9UBT2 640 aaPredicted RBP11.47□□□□□ -0.57
CLK4-206ENST00000520878 HNRNPCL1O60812 293 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 PSEN1P49768 467 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 CDH18Q13634 790 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 ARL13AQ5H913 290 aaPredicted RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 HABP4Q5JVS0 413 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 SH2D4BQ5SQS7 431 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 AGAP9Q5VTM2 703 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 MBLAC2Q68D91 279 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLK4-206ENST00000520878 TPGS1Q6ZTW0 290 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 SCUBE1Q8IWY4 988 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 SUGP1Q8IWZ8 645 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 DDI1Q8WTU0 396 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 MRGPRX2Q96LB1 330 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 POMKQ9H5K3 350 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 KCNK13Q9HB14 408 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 UTP6Q9NYH9 597 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 ARL5AQ9Y689 179 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 TXNDC9O14530 226 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 RHOBTB1O94844 696 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 CORO1AP31146 461 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 CCNFP41002 786 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 ABL2P42684 1182 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 CDK7P50613 346 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 NME5P56597 212 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 SMAD3P84022 425 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 DSC1Q08554 894 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 TRIM71Q2Q1W2 868 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 LAYNQ6UX15 382 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 SKA2Q8WVK7 121 aaPredicted RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 TMA16Q96EY4 203 aaKnown RBP11.46□□□□□ -0.57
CLK4-206ENST00000520878 YME1L1Q96TA2 773 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 PRKD2Q9BZL6 878 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 FAM96AQ9H5X1 160 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 EMCNQ9ULC0 261 aa11.46□□□□□ -0.57
CLK4-206ENST00000520878 KRT36O76013 467 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 URODP06132 367 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 FMO4P31512 558 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 CDH13P55290 713 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 CCSAPQ6IQ19 270 aaPredicted RBP11.46□□□□□ -0.58
CLK4-206ENST00000520878 TIFABQ6ZNK6 161 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 TMPRSS6Q8IU80 811 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 DEFB107AQ8IZN7 70 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 OR13C4Q8NGS5 318 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 DNAJC1Q96KC8 554 aaKnown RBP11.46□□□□□ -0.58
CLK4-206ENST00000520878 PPP1R2P1Q96PQ5 205 aa11.46□□□□□ -0.58
CLK4-206ENST00000520878 ATP6AP2A0A1C7CYW4 349 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 E5RI56 91 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 ATP6AP2O75787 350 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 CHRM3P20309 590 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 MSX2P35548 267 aaPredicted RBP11.45□□□□□ -0.58
CLK4-206ENST00000520878 NUDT2P50583 147 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 MAP7D1Q3KQU3 841 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 ZNF789Q5FWF6 425 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 TCHHL1Q5QJ38 904 aaPredicted RBP11.45□□□□□ -0.58
CLK4-206ENST00000520878 SNX30Q5VWJ9 437 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 RNF219Q5W0B1 726 aaPredicted RBP11.45□□□□□ -0.58
CLK4-206ENST00000520878 MRNIPQ6NTE8 343 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 SH2D5Q6ZV89 423 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 RAB44Q7Z6P3 723 aaPredicted RBP11.45□□□□□ -0.58
CLK4-206ENST00000520878 DDIASQ8IXT1 998 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 LRRC43Q8N309 656 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 TSGA13Q96PP4 275 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 STOML1Q9UBI4 398 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 PLA2G4CQ9UP65 541 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 SHROOM3Q8TF72 1996 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 STX7O15400 261 aaKnown RBP11.45□□□□□ -0.58
CLK4-206ENST00000520878 ACSL4O60488 711 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 APOA4P06727 396 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 GLDCP23378 1020 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 INSCQ1MX18 579 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 KHDC1Q4VXA5 237 aaKnown RBP11.45□□□□□ -0.58
CLK4-206ENST00000520878 LRRC8EQ6NSJ5 796 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 HEXDCQ8WVB3 486 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 CMTM5Q96DZ9 223 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 TSPAN17Q96FV3 270 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 IL12RB2Q99665 862 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 GPR63Q9BZJ6 419 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 NCKIPSDQ9NZQ3 722 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 FAM8A1Q9UBU6 413 aa11.45□□□□□ -0.58
CLK4-206ENST00000520878 CDYLQ9Y232 598 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms