RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 TBC1D25Q3MII6 688 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 ACAD10Q6JQN1 1059 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 UMODL1-AS1Q8N2C9 162 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 IFI44Q8TCB0 444 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 BTN2A2Q8WVV5 523 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 GBP4Q96PP9 640 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 DEPDC7Q96QD5 511 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 NCKIPSDQ9NZQ3 722 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 SALL4Q9UJQ4 1053 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 IGSF10Q6WRI0 2623 aa19.89■□□□□ 0.77
PABPC1-215ENST00000520804 FGF10O15520 208 aaPredicted RBP19.88■□□□□ 0.77
PABPC1-215ENST00000520804 CCDC172P0C7W6 258 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 TIMP2P16035 220 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 FERP16591 822 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 ITIH2P19823 946 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 ANP32AP39687 249 aaKnown RBP19.88■□□□□ 0.77
PABPC1-215ENST00000520804 THOP1P52888 689 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 YPEL5P62699 121 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 OGDHQ02218 1023 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 PTK2BQ14289 1009 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 CYTH1Q15438 398 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 DCUN1D2Q6PH85 259 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 VPS36Q86VN1 386 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 MCOLN2Q8IZK6 566 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 LMX1AQ8TE12 382 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 CXorf40AQ8TE69 158 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 C1QTNF7Q9BXJ2 289 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 CPEB1Q9BZB8 566 aaKnown RBP19.88■□□□□ 0.77
PABPC1-215ENST00000520804 ABCG4Q9H172 646 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 LHX3Q9UBR4 397 aa19.88■□□□□ 0.77
PABPC1-215ENST00000520804 BAHCC1Q9P281 2608 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 RIOK3O14730 519 aaKnown RBP19.87■□□□□ 0.77
PABPC1-215ENST00000520804 TPP1O14773 563 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 INSIG1O15503 277 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 SUOXP51687 545 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 CDKN3Q16667 212 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 DEFB133Q30KQ1 61 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 IRF2BP2Q7Z5L9 587 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 RBFAQ8N0V3 343 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 TP53I13Q8NBR0 393 aaPredicted RBP19.87■□□□□ 0.77
PABPC1-215ENST00000520804 MAPK15Q8TD08 544 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 EXOC2Q96KP1 924 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 TBATAQ96M53 351 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 TCEAL2Q9H3H9 227 aaPredicted RBP19.87■□□□□ 0.77
PABPC1-215ENST00000520804 PRORYQ9H606 182 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 LRRC19Q9H756 370 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 PDFQ9HBH1 243 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 MBNL1Q9NR56 388 aaKnown RBP19.87■□□□□ 0.77
PABPC1-215ENST00000520804 SPASTQ9UBP0 616 aa19.87■□□□□ 0.77
PABPC1-215ENST00000520804 UBA2Q9UBT2 640 aaPredicted RBP19.87■□□□□ 0.77
PABPC1-215ENST00000520804 SMG1Q96Q15 3661 aaKnown RBP19.87■□□□□ 0.77
PABPC1-215ENST00000520804 TOR1BO14657 336 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 LZTS3O60299 673 aaPredicted RBP19.86■□□□□ 0.77
PABPC1-215ENST00000520804 CSO75390 466 aaKnown RBP19.86■□□□□ 0.77
PABPC1-215ENST00000520804 DESP17661 470 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 HTR7P34969 479 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 TPI1P60174 286 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 KLHL40Q2TBA0 621 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 TMEM52BQ4KMG9 183 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 GUSBP11Q6P575 273 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 DNAAF5Q86Y56 855 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 PHACTR4Q8IZ21 702 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 HCAR2Q8TDS4 363 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 VCPIP1Q96JH7 1222 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 IL12RB2Q99665 862 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 SYT11Q9BT88 431 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 WRAP53Q9BUR4 548 aaKnown RBP19.86■□□□□ 0.77
PABPC1-215ENST00000520804 DONSONQ9NYP3 566 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 TAS2R14Q9NYV8 317 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 APOBEC3BQ9UH17 382 aaKnown RBP19.86■□□□□ 0.77
PABPC1-215ENST00000520804 PNMA8BQ9ULN7 279 aaPredicted RBP19.86■□□□□ 0.77
PABPC1-215ENST00000520804 RAI2Q9Y5P3 530 aa19.86■□□□□ 0.77
PABPC1-215ENST00000520804 CPED1A4D0V7 1026 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 EME2A4GXA9 379 aaPredicted RBP19.85■□□□□ 0.77
PABPC1-215ENST00000520804 USP12O75317 370 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 GCATO75600 419 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 PIGNO95427 931 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 MPOP05164 745 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 ATP1A3P13637 1013 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 TNFAIP3P21580 790 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 EIF4A3P38919 411 aaKnown RBP19.85■□□□□ 0.77
PABPC1-215ENST00000520804 NDST2P52849 883 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 ELP6Q0PNE2 266 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 NR0B2Q15466 257 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 PRRT3Q5FWE3 981 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 PPP1R2P3Q6NXS1 205 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 MACC1Q6ZN28 852 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 EFL1Q7Z2Z2 1120 aaKnown RBP19.85■□□□□ 0.77
PABPC1-215ENST00000520804 LSMEM2Q8N112 164 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 UBL7Q96S82 380 aaPredicted RBP19.85■□□□□ 0.77
PABPC1-215ENST00000520804 NCAPGQ9BPX3 1015 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 LRRC61Q9BV99 259 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 BOCQ9BWV1 1114 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 GPATCH2LQ9NWQ4 482 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 MYO6Q9UM54 1294 aa19.85■□□□□ 0.77
PABPC1-215ENST00000520804 TSPAN11A1L157 253 aa19.84■□□□□ 0.77
PABPC1-215ENST00000520804 J3KR12 359 aa19.84■□□□□ 0.77
PABPC1-215ENST00000520804 DXOO77932 396 aaKnown RBP19.84■□□□□ 0.77
PABPC1-215ENST00000520804 TGM2P21980 687 aa19.84■□□□□ 0.77
PABPC1-215ENST00000520804 XPAP23025 273 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms